RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 MN1Q10571 1320 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-206ENST00000514611 ZFC3H1O60293 1989 aaKnown RBP13.11□□□□□ -0.31
PFDN1-206ENST00000514611 hCG_1818297A0A087WSY0 165 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 PRR19A6NJB7 356 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 OR5K4A6NMS3 321 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 OR52A4PA6NMU1 304 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 KMOO15229 486 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 CDK14O94921 469 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 BRAFP15056 766 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 ZNF7P17097 686 aaPredicted RBP13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TYRP1P17643 537 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 RPL10P27635 214 aaKnown RBP13.11□□□□□ -0.31
PFDN1-206ENST00000514611 CA5AP35218 305 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 SLC19A1P41440 591 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 DRG2P55039 364 aaKnown RBP13.11□□□□□ -0.31
PFDN1-206ENST00000514611 WNT3AP56704 352 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 MC2RQ01718 297 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TFDP2Q14188 446 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
PFDN1-206ENST00000514611 SIRPB2Q5JXA9 342 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TRAPPC5Q8IUR0 188 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TRIM48Q8IWZ4 208 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 UNC5BQ8IZJ1 945 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 ZNF567Q8N184 647 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TTC30BQ8N4P2 665 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 KRT35Q92764 455 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 VPS35Q96QK1 796 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TRIM4Q9C037 500 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 PILRAQ9UKJ1 303 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 SLC30A1Q9Y6M5 507 aa13.11□□□□□ -0.31
PFDN1-206ENST00000514611 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 VEGFDO43915 354 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 STK17BO94768 372 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 UBXN7O94888 489 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 VIPP01282 170 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 XRCC1P18887 633 aaPredicted RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 HMGCLP35914 325 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 MAGEA1P43355 309 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 TFDP3Q5H9I0 405 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 FAM151BQ6UXP7 276 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 CEACAM20Q6UY09 585 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 TIPARPQ7Z3E1 657 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 GLT6D1Q7Z4J2 308 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 C11orf96Q7Z7L8 435 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 CCDC50Q8IVM0 306 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 KATNAL2Q8IYT4 538 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 AVL9Q8NBF6 648 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 IPMKQ8NFU5 416 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 NLGN4YQ8NFZ3 816 aaPredicted RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 GDAP1Q8TB36 358 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 BLOC1S5Q8TDH9 187 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 RSC1A1Q92681 617 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 P3H4Q92791 437 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 TGM7Q96PF1 710 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.312e-14■■■■■ 137.8
PFDN1-206ENST00000514611 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 SPRY4Q9C004 299 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 EPB41L1Q9H4G0 881 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 C10orf88Q9H8K7 445 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 STARD5Q9NSY2 213 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 SIDT1Q9NXL6 827 aaKnown RBP13.1□□□□□ -0.31
PFDN1-206ENST00000514611 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
PFDN1-206ENST00000514611 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
PFDN1-206ENST00000514611 LOC101059948A0A1B0GTJ6 334 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 C9P02748 559 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 ANKRD34CP0C6C1 535 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 SPAM1P38567 509 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 LEPRP48357 1165 aaKnown RBP13.09□□□□□ -0.31
PFDN1-206ENST00000514611 SEPHS1P49903 392 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 CTSCP53634 463 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 TMEM115Q12893 351 aaPredicted RBP13.09□□□□□ -0.31
PFDN1-206ENST00000514611 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 SLC1A5Q15758 541 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 CHRNA6Q15825 494 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 PID1Q7Z2X4 250 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 GPR150Q8NGU9 434 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 FCRL5Q96RD9 977 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
PFDN1-206ENST00000514611 GORASP1Q9BQQ3 440 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 UCK1Q9HA47 277 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 IL26Q9NPH9 171 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 IL17CQ9P0M4 197 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms