RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 AGERQ15109 404 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 KIAA1211LQ6NV74 962 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 RAB44Q7Z6P3 723 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 PIGWQ7Z7B1 504 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 PHYKPLQ8IUZ5 450 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 C10orf107Q8IVU9 208 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 AADATQ8N5Z0 425 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ANKS4BQ8N8V4 417 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 DDHD1Q8NEL9 900 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 RPLP0P6Q8NHW5 317 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 PPP4R1Q8TF05 950 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ZNF473Q8WTR7 871 aaKnown RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 ZNF514Q96K75 400 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 ELAC2Q9BQ52 826 aaKnown RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 SARS2Q9NP81 518 aaKnown RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 SORCS3Q9UPU3 1222 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 ITM2BQ9Y287 266 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 DENND4AQ7Z401 1863 aa15.82■□□□□ 0.12
NUP54-214ENST00000514307 KIF26AQ9ULI4 1882 aaPredicted RBP15.82■□□□□ 0.12
NUP54-214ENST00000514307 A0A1W2PP55 124 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 ANTXRLA6NF34 631 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 TMEM114B3SHH9 223 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 G3V2L1 256 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 EIF3FO00303 357 aaPredicted RBP15.81■□□□□ 0.12
NUP54-214ENST00000514307 PLK4O00444 970 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 EDF1O60869 148 aaKnown RBP15.81■□□□□ 0.12
NUP54-214ENST00000514307 TGDSO95455 350 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 FTH1P02794 183 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 GSTM1P09488 218 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 IL9P15248 144 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 CD1DP15813 335 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 KCNA4P22459 653 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 CLCN7P51798 805 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 DGKEP52429 567 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 DNAJB13P59910 316 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 NAA20P61599 178 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 GSTM4Q03013 218 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 DLG1Q12959 904 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 AGBL4Q5VU57 503 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 KIAA1161Q6NSJ0 714 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 TMEM207Q6UWW9 146 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 MICALCLQ6ZW33 695 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 OTOAQ7RTW8 1153 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 ISCA2Q86U28 154 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 PIM3Q86V86 326 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 CRLF3Q8IUI8 442 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 SPATA6LQ8N4H0 392 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 TMEM151AQ8N4L1 468 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 ZBTB2Q8N680 514 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 CLDN19Q8N6F1 224 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 SIDT2Q8NBJ9 832 aaKnown RBP15.81■□□□□ 0.12
NUP54-214ENST00000514307 OR14C36Q8NHC7 312 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 ANKRD49Q8WVL7 239 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 ASB12Q8WXK4 309 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 KIAA1191Q96A73 305 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 BOCQ9BWV1 1114 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 MKRN2Q9H000 416 aaKnown RBP15.81■□□□□ 0.12
NUP54-214ENST00000514307 LMAN1LQ9HAT1 526 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 TRIM39Q9HCM9 518 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 PREBQ9HCU5 417 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 PRDM6Q9NQX0 595 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 FBXL21Q9UKT6 434 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 NDRG2Q9UN36 371 aaKnown RBP15.81■□□□□ 0.12
NUP54-214ENST00000514307 REV3LO60673 3130 aa15.81■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3DA0A087WVF3 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3IA0A087WXS9 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3EA0A087X179 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3KA0A087X1G2 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3FA6NER0 549 aaPredicted RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 IGLON5A6NGN9 336 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 CHURC1-FNTBB4DL54 471 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TARM1B6A8C7 271 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3LB9A6J9 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 SPINT1O43278 529 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 VEGFDO43915 354 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TOP3BO95985 862 aaKnown RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3HP0C7X1 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 ENO3P13929 434 aaPredicted RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 TEAD1P28347 426 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 SERPINB5P36952 375 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TMEM115Q12893 351 aaPredicted RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 GTF2H3Q13889 308 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 PCLAFQ15004 111 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 LIPMQ5VYY2 423 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3GQ6DHY5 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3CQ6IPX1 549 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 SPATS2Q86XZ4 545 aaKnown RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 TBC1D3Q8IZP1 549 aaPredicted RBP15.8■□□□□ 0.12
NUP54-214ENST00000514307 CACNA2D3Q8IZS8 1091 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 MYO1HQ8N1T3 1032 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 CD200R1Q8TD46 325 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 EEF1AKMT1Q8WVE0 214 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 FAM131CQ96AQ9 280 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 C7orf26Q96N11 449 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TRIM55Q9BYV6 548 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 FGFR1OP2Q9NVK5 253 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 XPR1Q9UBH6 696 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 TMPRSS11EQ9UL52 423 aa15.8■□□□□ 0.12
NUP54-214ENST00000514307 PLRG1O43660 514 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms