RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CAPN5O15484 640 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 PMPCBO75439 489 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 UBXN7O94888 489 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 NDST3O95803 873 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 DLGAP3O95886 979 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 VIPP01282 170 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TPM3P06753 285 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 PRKAR1AP10644 381 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TNNT1P13805 278 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 BRAFP15056 766 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TYRP1P17643 537 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 PTPN3P26045 913 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 RPL10P27635 214 aaKnown RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 CD68P34810 354 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 CCR10P46092 362 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ABHD18Q0P651 414 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 NOMO1Q15155 1222 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TEX44Q53QW1 395 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 LRRC38Q5VT99 294 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 MFSD7Q6UXD7 560 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 C9orf72Q96LT7 481 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 CATSPER2Q96P56 530 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TGM7Q96PF1 710 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TIMM29Q9BSF4 260 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 NHEJ1Q9H9Q4 299 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ABHD10Q9NUJ1 306 aa12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ZNHIT6Q9NWK9 470 aaKnown RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 ZNF106Q9H2Y7 1883 aaKnown RBP12.02□□□□□ -0.49
SNHG4-208ENST00000514110 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 A0A0A6YYK5 440 aaPredicted RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 OR52A4PA6NMU1 304 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 PDZK1P1A8MUH7 402 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 ARHGAP6O43182 974 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 VEGFDO43915 354 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 CDK14O94921 469 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 ZNF28P17035 718 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 OAS2P29728 719 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 STAT5AP42229 794 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 LEPRP48357 1165 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 SH3BP2P78314 561 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 FOXM1Q08050 763 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 CDC20Q12834 499 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 TRIM14Q14142 442 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 LLGL1Q15334 1064 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 ABRAXAS1Q6UWZ7 409 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 C11orf96Q7Z7L8 435 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 TRIM48Q8IWZ4 208 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 RHOT2Q8IXI1 618 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 RSC1A1Q92681 617 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 KIAA1143Q96AT1 154 aaPredicted RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 DDX56Q9NY93 547 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 TRIM10Q9UDY6 481 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 TUBD1Q9UJT1 453 aa12.01□□□□□ -0.49
SNHG4-208ENST00000514110 MRPS18BQ9Y676 258 aaKnown RBP12.01□□□□□ -0.49
SNHG4-208ENST00000514110 F5H423 210 aaPredicted RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 CBFA2T2O43439 604 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 KIF1CO43896 1103 aaKnown RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 PECAM1P16284 738 aaPredicted RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 AMD1P17707 334 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 NFKB1P19838 968 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 COMTP21964 271 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 F8A1P23610 371 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 CA5AP35218 305 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 HMGCLP35914 325 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 CDKN2BP42772 138 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 NR2C2P49116 596 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 SEPHS1P49903 392 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 TLE1Q04724 770 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 ADCY2Q08462 1091 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 WASHC5Q12768 1159 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 TMEM115Q12893 351 aaPredicted RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 MAP7Q14244 749 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 GPR18Q14330 331 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 TAZQ16635 292 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 SKIDA1Q1XH10 827 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 ODF2Q5BJF6 829 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 ATP1A1-AS1Q5TC04 95 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 CCDC70Q6NSX1 233 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 C16orf46Q6P387 395 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 KDELC1Q6UW63 502 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 WASH2PQ6VEQ5 465 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 VSTM4Q8IW00 320 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 TTC30BQ8N4P2 665 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 ESX1Q8N693 406 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 TFB1MQ8WVM0 346 aaKnown RBP12□□□□□ -0.49
SNHG4-208ENST00000514110 STARD8Q92502 1023 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 COL26A1Q96A83 441 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 CCDC42Q96M95 316 aa12□□□□□ -0.49
SNHG4-208ENST00000514110 SRPK1Q96SB4 655 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms