RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CUZD1Q86UP6 607 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TMPRSS6Q8IU80 811 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CLYBLQ8N0X4 340 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CCNYL1Q8N7R7 359 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 PTGR2Q8N8N7 351 aaPredicted RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 TERB1Q8NA31 727 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 SIDT2Q8NBJ9 832 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 MAPK15Q8TD08 544 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ACTRT2Q8TDY3 377 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CYB5D2Q8WUJ1 264 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 UCMAQ8WVF2 138 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 SGF29Q96ES7 293 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 PANX3Q96QZ0 392 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 COPS8Q99627 209 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CIPCQ9C0C6 399 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 S1PR5Q9H228 398 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TMEM245Q9H330 911 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 MMADHCQ9H3L0 296 aaPredicted RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 EBF3Q9H4W6 596 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ZNF385DQ9H6B1 395 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RDH14Q9HBH5 336 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TCF7L2Q9NQB0 619 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 SPATS2LQ9NUQ6 558 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 NUDT4Q9NZJ9 180 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 GALPQ9UBC7 116 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 SUN2Q9UH99 717 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 PLA2G4CQ9UP65 541 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 A0A0U1RQS6 177 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 C16orf96A6NNT2 1141 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UBXN8O00124 270 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CDC7O00311 574 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 QSOX1O00391 747 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 KPNA5O15131 536 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 DIAPH2O60879 1101 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 WFS1O76024 890 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 SUPT7LO94864 414 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 MPC1LP0DKB6 136 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ENO3P13929 434 aaPredicted RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 PSMC3P17980 439 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UGT1A6P19224 532 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UGT1A1P22309 533 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UGT1A4P22310 534 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CA5AP35218 305 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UGT1A3P35503 534 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UGT1A5P35504 534 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 MMP12P39900 470 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 OPRD1P41143 372 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 MTHFRP42898 656 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 KCNJ2P63252 427 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ELP6Q0PNE2 266 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ENPP2Q13822 863 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 COL19A1Q14993 1142 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 HERC3Q15034 1050 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PCBP2Q15366 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
RNF4-220ENST00000513578 TSNQ15631 228 aaKnown RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 TTLL9Q3SXZ7 439 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ATP13A5Q4VNC0 1218 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 SLC9B1Q4ZJI4 515 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 C9orf64Q5T6V5 341 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 HENMT1Q5T8I9 393 aaKnown RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 ANKS6Q68DC2 871 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ERAP2Q6P179 960 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CYB5D1Q6P9G0 228 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CYHR1Q6ZMK1 362 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 NEK10Q6ZWH5 1172 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
RNF4-220ENST00000513578 CPNE9Q8IYJ1 553 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 FBXO39Q8N4B4 442 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ZBTB2Q8N680 514 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PDPRQ8NCN5 879 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CEP70Q8NHQ1 597 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 ZNF483Q8TF39 744 aaPredicted RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 SORCS1Q8WY21 1168 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 OR8D1Q8WZ84 308 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 LINGO1Q96FE5 620 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PRR11Q96HE9 360 aaPredicted RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 ZSCAN5AQ9BUG6 496 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 TBC1D10AQ9BXI6 508 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 UNKQ9C0B0 810 aaKnown RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 FAM83DQ9H4H8 585 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 MEAF6Q9HAF1 191 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 KCTD5Q9NXV2 234 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 TAS2R1Q9NYW7 299 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 THAP10Q9P2Z0 257 aaPredicted RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 IKZF3Q9UKT9 509 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PPM1HQ9ULR3 514 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 CDYLQ9Y232 598 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 STK38LQ9Y2H1 464 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 MTF2Q9Y483 593 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms