RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 CLPBQ9H078 707 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 OR2AG1Q9H205 316 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 GPR27Q9NS67 375 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 ATXN10Q9UBB4 475 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 PCDHB1Q9Y5F3 818 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 PRSS21Q9Y6M0 314 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 A0A1W2PR77 199 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TLDC2A0PJX2 215 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 HMX2A2RU54 273 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SGTAO43765 313 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SASH3O75995 380 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 RHOBTB1O94844 696 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CDK14O94921 469 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 AP2A2O94973 939 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ESR1P03372 595 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 PKMP14618 531 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 ITPKAP23677 461 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 FMO4P31512 558 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SLCO1A2P46721 670 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 OVGP1Q12889 678 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 PDE1CQ14123 709 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 NFATC4Q14934 902 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CTSL3PQ5NE16 218 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 LYSMD4Q5XG99 296 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 MACC1Q6ZN28 852 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CEP68Q76N32 757 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ARMCX6Q7L4S7 300 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TAOK1Q7L7X3 1001 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 IQCHQ86VS3 1027 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DCP2Q8IU60 420 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 RGL4Q8IZJ4 473 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CLDN19Q8N6F1 224 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 RASGEF1AQ8N9B8 481 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 MFSD2AQ8NA29 543 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 OR13H1Q8NG92 308 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GPR22Q99680 433 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TM9SF3Q9HD45 589 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 LGALS13Q9UHV8 139 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GNPTGQ9UJJ9 305 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SLC17A4Q9Y2C5 497 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TMEM98Q9Y2Y6 226 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 MTO1Q9Y2Z2 717 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 COMMD10Q9Y6G5 202 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 PI4KAP42356 2102 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 LRP4O75096 1905 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TP53BP1Q12888 1972 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 WDFY4Q6ZS81 3184 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 H3BMM5 538 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 AGPSO00116 658 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 QSOX1O00391 747 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CHUKO15111 745 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ATP8B1O43520 1251 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 NUAK1O60285 661 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DNAJC6O75061 913 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 KRT37O76014 449 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 KRT38O76015 456 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ASMTLO95671 621 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 WNT1P04628 370 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CEACAM5P06731 702 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SNRPAP09012 282 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 ZNF8P17098 575 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 CD9P21926 228 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 KELP23276 732 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CD38P28907 300 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 POLD2P49005 469 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DNAJC3Q13217 504 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SIM2Q14190 667 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 TPRG1LQ5T0D9 272 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 RBM20Q5T481 1227 aaKnown RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 LGSNQ5TDP6 509 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 MROH9Q5TGP6 573 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 FAM45BPQ6NSW5 357 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DET1Q7L5Y6 550 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SLC22A18ASQ8N1D0 253 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GPATCH11Q8N954 259 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 FAM45AQ8TCE6 357 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 MTBPQ96DY7 904 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SGF29Q96ES7 293 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 KLHDC7BQ96G42 594 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 SCARF2Q96GP6 870 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 ATXN7L3BQ96GX2 97 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms