RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 SH3KBP1Q96B97 665 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 SHOC2Q9UQ13 582 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 PRKAB1Q9Y478 270 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 PCDHA3Q9Y5H8 950 aa14.37□□□□□ -0.11
LETM1-207ENST00000512669 ZFC3H1O60293 1989 aaKnown RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 LOC285095A0A1B0GVY8 99 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 CLEC18AA5D8T8 446 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 F5H423 210 aaPredicted RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 PJA2O43164 708 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 PMPCBO75439 489 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 NFKB1P19838 968 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 CTNNA1P35221 906 aaKnown RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 MC2RQ01718 297 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 SLC14A2Q15849 920 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ZNF648Q5T619 568 aaPredicted RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 NKAIN2Q5VXU1 208 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ANKS6Q68DC2 871 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 CLEC18BQ6UXF7 455 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 GALNT13Q8IUC8 556 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ZNF567Q8N184 647 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 FAM26EQ8N5C1 309 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 BMPERQ8N8U9 685 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 AVL9Q8NBF6 648 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 CLEC18CQ8NCF0 446 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ALG3Q92685 438 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 P3H4Q92791 437 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 OXNAD1Q96HP4 312 aaPredicted RBP14.36□□□□□ -0.11
LETM1-207ENST00000512669 QKIQ96PU8 341 aaKnown RBP eCLIP14.36□□□□□ -0.11
LETM1-207ENST00000512669 GORASP1Q9BQQ3 440 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ZFYVE1Q9HBF4 777 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 FBXO8Q9NRD0 319 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 OCIAD1Q9NX40 245 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 TRIM10Q9UDY6 481 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 TMPRSS11EQ9UL52 423 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 ZNF711Q9Y462 761 aa14.36□□□□□ -0.11
LETM1-207ENST00000512669 RELNP78509 3460 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 GRID2IPA4D2P6 1211 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 RGSL1A5PLK6 1076 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 NDST3O95803 873 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 SLC2A4P14672 509 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 CHRNA4P43681 627 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 EPHA4P54764 986 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 WNT3AP56704 352 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 MAP7Q14244 749 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 LACTB2Q53H82 288 aaPredicted RBP14.35□□□□□ -0.11
LETM1-207ENST00000512669 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
LETM1-207ENST00000512669 ARHGAP22Q7Z5H3 698 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 SFRP1Q8N474 314 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 CCHCR1Q8TD31 782 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 MRGPRX2Q96LB1 330 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 FCRL5Q96RD9 977 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 SPRY4Q9C004 299 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 ARFGAP3Q9NP61 516 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 PKD2L2Q9NZM6 624 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 TMEM184BQ9Y519 407 aaPredicted RBP14.35□□□□□ -0.11
LETM1-207ENST00000512669 KCTD3Q9Y597 815 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
LETM1-207ENST00000512669 USP9YO00507 2555 aaPredicted RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 SPTAN1Q13813 2472 aaKnown RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 TRBV23OR9-2A0A075B6M9 112 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 ASMTLO95671 621 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 BPIP17213 487 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 MPSTP25325 297 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 CTNNA2P26232 953 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 RBL1P28749 1068 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 CA5AP35218 305 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 VAV2P52735 878 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 ALS2CLQ60I27 953 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 PID1Q7Z2X4 250 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 ATCAYQ86WG3 371 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 CCDC50Q8IVM0 306 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 ESX1Q8N693 406 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 SLC37A2Q8TED4 501 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 STARD8Q92502 1023 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 RBM41Q96IZ5 413 aaKnown RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 BAG1Q99933 345 aaPredicted RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 FAM118BQ9BPY3 351 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 SARS2Q9NP81 518 aaKnown RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 TMEM9Q9P0T7 183 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 VPS18Q9P253 973 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 ATXN10Q9UBB4 475 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
LETM1-207ENST00000512669 SPTBN1Q01082 2364 aaKnown RBP14.34□□□□□ -0.11
LETM1-207ENST00000512669 HACD1B0YJ81 288 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 APOC4-APOC2K7ER74 178 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 NKX2-8O15522 239 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 APOC2P02655 101 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 SLC4A1P02730 911 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 PRKAR1AP10644 381 aa14.33□□□□□ -0.12
LETM1-207ENST00000512669 PYGMP11217 842 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms