RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 K7ESM1 405 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 INSIG1O15503 277 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 LATO43561 262 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 PIAS2O75928 621 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MT-CYBP00156 380 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 INHBAP08476 426 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 ITGA2BP08514 1039 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CA4P22748 312 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MGAT1P26572 445 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CD70P32970 193 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 HADHAP40939 763 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MSH2P43246 934 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 POLD2P49005 469 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SERPINH1P50454 418 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SLC18A2Q05940 514 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CDK18Q07002 472 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MGAT5Q09328 741 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CYTH1Q15438 398 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SLC1A5Q15758 541 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 ANKRD20A4Q4UJ75 823 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MANEAQ5SRI9 462 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 RNF219Q5W0B1 726 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 PDPK2PQ6A1A2 396 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 KIAA0930Q6ICG6 404 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 STK40Q8N2I9 435 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MPP5Q8N3R9 675 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 TAB3Q8N5C8 712 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 DNAAF3Q8N9W5 541 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 KDM1BQ8NB78 822 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 ZSCAN1Q8NBB4 408 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SPATA22Q8NHS9 363 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 ACMSDQ8TDX5 336 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 KLK6Q92876 244 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CERS2Q96G23 380 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 SRPK1Q96SB4 655 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MCMBPQ9BTE3 642 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CEP44Q9C0F1 390 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 MUC3BQ9H195 1237 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 TREX1Q9NSU2 369 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 NLGN3Q9NZ94 848 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 VPS51Q9UID3 782 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 TCAF1Q9Y4C2 921 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 ICE1Q9Y2F5 2266 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
PDLIM5-217ENST00000512274 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 MROH6A6NGR9 719 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 TTC34A8MYJ7 566 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 HAX1O00165 279 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 MUSKO15146 869 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 LZTS3O60299 673 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 FZD6O60353 706 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 SOCS5O75159 536 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 TMCC1O94876 653 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 NDST3O95803 873 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 IL1BP01584 269 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 SNRPAP09012 282 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 MDH1P40925 334 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CCNFP41002 786 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CASRP41180 1078 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CSKP41240 450 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 METAP1P53582 386 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CSE1LP55060 971 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 SESN2P58004 480 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 OVGP1Q12889 678 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 IHHQ14623 411 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 GRM3Q14832 879 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 TERF2Q15554 542 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 FSCBQ5H9T9 825 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 PERM1Q5SV97 790 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 C9orf64Q5T6V5 341 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 KCTD16Q68DU8 428 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 ZNF787Q6DD87 383 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 KIAA0408Q6ZU52 694 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 SH2D5Q6ZV89 423 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 IQCHQ86VS3 1027 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CARNMT1Q8N4J0 409 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 SH2D3CQ8N5H7 860 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 IPMKQ8NFU5 416 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 GABPB2Q8TAK5 448 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 FAM129BQ96TA1 746 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 CPNE1Q99829 537 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 FICDQ9BVA6 458 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 TDRD1Q9BXT4 1180 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 EVA1BQ9NVM1 165 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 VPS28Q9UK41 221 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 IKBKGQ9Y6K9 419 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 RPS6KL1Q9Y6S9 549 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 RP1P56715 2156 aa10.42□□□□□ -0.74
PDLIM5-217ENST00000512274 BOD1L1Q8NFC6 3051 aa10.41□□□□□ -0.74
PDLIM5-217ENST00000512274 A0A1W2PQ67 120 aa10.41□□□□□ -0.74
PDLIM5-217ENST00000512274 A1L4Q6 167 aa10.41□□□□□ -0.74
PDLIM5-217ENST00000512274 POLR3GO15318 223 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-217ENST00000512274 HTRA2O43464 458 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms