RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PPP2R2CQ9Y2T4 447 aa16.26■□□□□ 0.19
DDX41-213ENST00000512027 KMOO15229 486 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 VEGFDO43915 354 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 DXOO77932 396 aaKnown RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 TNFSF15O95150 251 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 CPNE6O95741 557 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 F3P13726 295 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 HOXB3P14651 431 aaPredicted RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 RBMS1P29558 406 aaKnown RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 CCKBRP32239 447 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 ETV5P41161 510 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 FASLGP48023 281 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 PPM1FP49593 454 aaPredicted RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 HHEXQ03014 270 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 ZFP36L1Q07352 338 aaKnown RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 PEX6Q13608 980 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 C16orf72Q14CZ0 275 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 OASLQ15646 514 aaKnown RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 PIM3Q86V86 326 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 FBXO39Q8N4B4 442 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 RASGEF1AQ8N9B8 481 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 GLIS1Q8NBF1 620 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 ZNF578Q96N58 590 aaPredicted RBP16.25■□□□□ 0.19
DDX41-213ENST00000512027 TMEM74Q96NL1 305 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 SLC46A1Q96NT5 459 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 ALS2CR12Q96Q35 445 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 LOXL2Q9Y4K0 774 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 PCDHGA8Q9Y5G5 932 aa16.25■□□□□ 0.19
DDX41-213ENST00000512027 PRAMEF33A0A0G2JMD5 474 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 CCDC78A2IDD5 438 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 PRR19A6NJB7 356 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 OR2AG2A6NM03 316 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 C2orf81A6NN90 581 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 PLD2O14939 933 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 IFNB1P01574 187 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 RPL10P27635 214 aaKnown RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 PBLDP30039 288 aaPredicted RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 ABCG1P45844 678 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 MAPK9P45984 424 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 ZNF140P52738 457 aaPredicted RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 DRG2P55039 364 aaKnown RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 PCBP4P57723 403 aaKnown RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 XIAPP98170 497 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 GTF2H3Q13889 308 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 SIX1Q15475 284 aaPredicted RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 ZDHHC20Q5W0Z9 365 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 DET1Q7L5Y6 550 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 LSMEM2Q8N112 164 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 BEND7Q8N7W2 519 aaPredicted RBP16.24■□□□□ 0.19
DDX41-213ENST00000512027 DDHD1Q8NEL9 900 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 ZNF398Q8TD17 642 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 BRSK1Q8TDC3 778 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 CCDC74BQ96LY2 380 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 TTC25Q96NG3 672 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 SLC38A3Q99624 504 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 STRADBQ9C0K7 418 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 THSD1Q9NS62 852 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 PISDQ9UG56 409 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 PTPRQQ9UMZ3 2332 aa16.24■□□□□ 0.19
DDX41-213ENST00000512027 LOC400499M0QZD8 3231 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 IGHV5-10-1A0A0J9YXX1 117 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 PDZK1P1A8MUH7 402 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 CDRT15L2A8MXV6 281 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 GPR89AB7ZAQ6 455 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 LDB2O43679 373 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 PPFIA2O75334 1257 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 SRP72O76094 671 aaKnown RBP16.23■□□□□ 0.19
DDX41-213ENST00000512027 GPR89BP0CG08 455 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 PRSS56P0CW18 603 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 BRAFP15056 766 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 AKT1P31749 480 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 CXCR5P32302 372 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 GPR3P46089 330 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ERVPABLB-1P60509 514 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ITGA9Q13797 1035 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 SEPT6Q14141 434 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 POU6F1Q14863 301 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 LDLRAP1Q5SW96 308 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 TMEM220Q6QAJ8 160 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 LRRC69Q6ZNQ3 347 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ZNF662Q6ZS27 426 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 SPACA3Q8IXA5 215 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 DTX3LQ8TDB6 740 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 RTP4Q96DX8 246 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 DNAJC1Q96KC8 554 aaKnown RBP16.23■□□□□ 0.19
DDX41-213ENST00000512027 TIMM29Q9BSF4 260 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 TBC1D10AQ9BXI6 508 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ASB8Q9H765 288 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 LRRC40Q9H9A6 602 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ARNT2Q9HBZ2 717 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 SARS2Q9NP81 518 aaKnown RBP16.23■□□□□ 0.19
DDX41-213ENST00000512027 FAM8A1Q9UBU6 413 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 ZNF148Q9UQR1 794 aa16.23■□□□□ 0.19
DDX41-213ENST00000512027 OR52A4PA6NMU1 304 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms