RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SGF29Q96ES7 293 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 PBKQ96KB5 322 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 TRIM56Q9BRZ2 755 aaKnown RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 RDH14Q9HBH5 336 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 NLE1Q9NVX2 485 aaPredicted RBP13.37□□□□□ -0.27
SNF8-206ENST00000509989 TMEM9Q9P0T7 183 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 PAK5Q9P286 719 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 FAM8A1Q9UBU6 413 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 SNX12Q9UMY4 172 aa13.37□□□□□ -0.27
SNF8-206ENST00000509989 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 AGAP14A8MT82 685 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 CRTAMO95727 393 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 MPOP05164 745 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 APRTP07741 180 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 HOXB3P14651 431 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 GLB1P16278 677 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 MPSTP25325 297 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 RPL10P27635 214 aaKnown RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 ALDH4A1P30038 563 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 CSF2RBP32927 897 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 COILP38432 576 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 NFATC2Q13469 925 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 SEMA3AQ14563 771 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 INSCQ1MX18 579 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 AMZ1Q400G9 498 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 IYDQ6PHW0 289 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 TMEM220Q6QAJ8 160 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 USP53Q70EK8 1073 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 ZNF438Q7Z4V0 828 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 TRAPPC5Q8IUR0 188 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 SFRP1Q8N474 314 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 KDF1Q8NAX2 398 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 OR13J1Q8NGT2 312 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 NAT6Q93015 286 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 PRR11Q96HE9 360 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 CDKN2AIPNLQ96HQ2 116 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 NUDT22Q9BRQ3 303 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 SEMA6CQ9H3T2 930 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 RMI1Q9H9A7 625 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 PRSS21Q9Y6M0 314 aa13.36□□□□□ -0.27
SNF8-206ENST00000509989 ANKRD11Q6UB99 2663 aaPredicted RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 URB1O60287 2271 aaKnown RBP13.36□□□□□ -0.27
SNF8-206ENST00000509989 CCDC162PA2VCL2 907 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 OR52A4PA6NMU1 304 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 D6RAR5 112 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 E7EVH7 732 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 KMOO15229 486 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 PSMD3O43242 534 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 NUDT21O43809 227 aaKnown RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 VEGFDO43915 354 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 KIF5CO60282 957 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 AVILO75366 819 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 POP7O75817 140 aaKnown RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 TMEM63AO94886 807 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 KRT14P02533 472 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 F7P08709 466 aaPredicted RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 HGFP14210 728 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 PSMA3P25788 255 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CD1CP29017 333 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 LMAN1P49257 510 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 SESN2P58004 480 aaPredicted RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 GNG11P61952 73 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CDH17Q12864 832 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 LRP8Q14114 963 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 NFE2L1Q14494 772 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CLCA4Q14CN2 919 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CYP1B1Q16678 543 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 FNBP1LQ5T0N5 605 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 SERPINA9Q86WD7 417 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
SNF8-206ENST00000509989 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 JPH3Q8WXH2 748 aaPredicted RBP13.35□□□□□ -0.27
SNF8-206ENST00000509989 NRTNQ99748 197 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 NCKIPSDQ9NZQ3 722 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 APPL1Q9UKG1 709 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 PSMD13Q9UNM6 376 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 ZKSCAN5Q9Y2L8 839 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 ADAMTS20P59510 1910 aa13.35□□□□□ -0.27
SNF8-206ENST00000509989 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 TRBV5-4A0A0C4DH59 114 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 PGRMC1O00264 195 aaKnown RBP13.34□□□□□ -0.27
SNF8-206ENST00000509989 BRINP1O60477 761 aa13.34□□□□□ -0.27
SNF8-206ENST00000509989 KRT37O76014 449 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms