RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KCNJ11Q14654 390 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CHRNA6Q15825 494 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CCNG2Q16589 344 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PARP6Q2NL67 630 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PLA2G4EQ3MJ16 856 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC38Q502W7 563 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PYCR3Q53H96 274 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CERCAMQ5T4B2 595 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PAPD7Q5XG87 772 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 ITPRIPL1Q6GPH6 555 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 DHRS13Q6UX07 377 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM151BQ6UXP7 276 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM83HQ6ZRV2 1179 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 BZW1Q7L1Q6 419 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 GLT6D1Q7Z4J2 308 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 NLRP8Q86W28 1048 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 DCP2Q8IU60 420 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CREG2Q8IUH2 290 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PIANPQ8IYJ0 282 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 NRSN1Q8IZ57 195 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 MPP5Q8N3R9 675 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 TRAM1L1Q8N609 369 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM181AQ8N9Y4 354 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 GPR156Q8NFN8 814 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 OR13J1Q8NGT2 312 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 GPBAR1Q8TDU6 330 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 ADAMTS14Q8WXS8 1223 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 C1QTNF7Q9BXJ2 289 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CARS2Q9HA77 564 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 UGT1A7Q9HAW7 530 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 UGT1A10Q9HAW8 530 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 UGT1A8Q9HAW9 530 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 PLAC1Q9HBJ0 212 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CYP4F12Q9HCS2 524 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 CASS4Q9NQ75 786 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 SPATS2LQ9NUQ6 558 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 SMOXQ9NWM0 555 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 NLGN3Q9NZ94 848 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 SIRPGQ9P1W8 387 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 GPC6Q9Y625 555 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 APC2O95996 2303 aa7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 SPENQ96T58 3664 aaKnown RBP7.13□□□□□ -1.27
TOPBP1-207ENST00000509162 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TRBV5-4A0A0C4DH59 114 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 A0A1W2PQM1 296 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GOLGA6CA6NDK9 693 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GOLGA6L9A6NEM1 432 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 MROH6A6NGR9 719 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 AGAP14A8MT82 685 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 C1QTNF9BB2RNN3 333 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TGFBR3LH3BV60 316 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CACNB4O00305 520 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TOR1BO14657 336 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TNFRSF10CO14798 259 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CHUKO15111 745 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TNFSF14O43557 240 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 MAGEC1O60732 1142 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PHF2O75151 1096 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 RFPL3O75679 317 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 ANXA9O76027 345 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 LDOC1O95751 146 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 IFNB1P01574 187 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PTMAP06454 111 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 C1QTNF9P0C862 333 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GOLGA6DP0CG33 693 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CKMT1AP12532 417 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 BRAFP15056 766 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CA4P22748 312 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CSF2RBP32927 897 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 COILP38432 576 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 SPAM1P38567 509 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 MAGEA6P43360 314 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 VPS41P49754 854 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CRADDP78560 199 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 MRPS25P82663 173 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TMPRSS15P98073 1019 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 SHC2P98077 582 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CTBSQ01459 385 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 HLTFQ14527 1009 aaKnown RBP eCLIP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 POU6F1Q14863 301 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 TRIP13Q15645 432 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 SMAD1Q15797 465 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GPRC6AQ5T6X5 926 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CRTC3Q6UUV7 619 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 ARHGEF18Q6ZSZ5 1173 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 RD3Q7Z3Z2 195 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 NAGSQ8N159 534 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 LILRA3Q8N6C8 439 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PAF1Q8N7H5 531 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 DDHD1Q8NEL9 900 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 OR4K2Q8NGD2 314 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 LKAAEAR1Q8TD35 194 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 ACTRT1Q8TDG2 376 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CPT1BQ92523 772 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GLYATL1Q969I3 302 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 HIC2Q96JB3 615 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms