RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SLC9B2Q86UD5 537 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PIM3Q86V86 326 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 TRIM48Q8IWZ4 208 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 FBXO39Q8N4B4 442 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 TRIM58Q8NG06 486 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 ZNF398Q8TD17 642 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 BRSK1Q8TDC3 778 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 FGF11Q92914 225 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 VPS35Q96QK1 796 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 NUDT22Q9BRQ3 303 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 ZCCHC2Q9C0B9 1178 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 SEMA6CQ9H3T2 930 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 FAM96AQ9H5X1 160 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 STN1Q9H668 368 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 ASB8Q9H765 288 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 LRRC40Q9H9A6 602 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PISDQ9UG56 409 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 SLC23A2Q9UGH3 650 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 CRLS1Q9UJA2 301 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 TMPRSS11EQ9UL52 423 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PIKFYVEQ9Y2I7 2098 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 A0A1W2PNU3 283 aaPredicted RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 TMX2-CTNND1H3BSU7 103 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 PSMD3O43242 534 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 PPFIA2O75334 1257 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 SRP72O76094 671 aaKnown RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 CPNE6O95741 557 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 FGGP02679 453 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 F3P13726 295 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 SLC2A4P14672 509 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 VCLP18206 1134 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 ITPKBP27987 946 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 ABCG1P45844 678 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 MAPK10P53779 464 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 TERF1P54274 439 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 PCBP4P57723 403 aaKnown RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 KCTD19Q17RG1 926 aaPredicted RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 LONRF2Q1L5Z9 754 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 ZRANB3Q5FWF4 1079 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 LDLRAP1Q5SW96 308 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 GPRC6AQ5T6X5 926 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 DENND5AQ6IQ26 1287 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 IYDQ6PHW0 289 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 TMEM220Q6QAJ8 160 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 PPP1R21Q6ZMI0 780 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 MICALCLQ6ZW33 695 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 GSTA5Q7RTV2 222 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 C17orf82Q86X59 251 aaPredicted RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 LSMEM2Q8N112 164 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 SFRP1Q8N474 314 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 RASGEF1AQ8N9B8 481 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 DNAAF3Q8N9W5 541 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 RCBTB1Q8NDN9 531 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 OR52K1Q8NGK4 314 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 ANP32BQ92688 251 aaKnown RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 DNAJC1Q96KC8 554 aaKnown RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 ZNF578Q96N58 590 aaPredicted RBP9.25□□□□□ -0.93
DDX41-209ENST00000508279 ETNK1Q9HBU6 452 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 THSD1Q9NS62 852 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 KLHL3Q9UH77 587 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 LOXL2Q9Y4K0 774 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 SLC30A1Q9Y6M5 507 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 BPTFQ12830 3046 aa9.25□□□□□ -0.93
DDX41-209ENST00000508279 IGHV1OR21-1A0A087WYE8 117 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 A8MU76 341 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 GPR89AB7ZAQ6 455 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 GAPDHSO14556 408 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 PLD2O14939 933 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 CHUKO15111 745 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 POP7O75817 140 aaKnown RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 AP2A1O95782 977 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 GAS8O95995 478 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 VIPP01282 170 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 ZSCAN5DPP0CG00 497 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 GPR89BP0CG08 455 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 HOXB3P14651 431 aaPredicted RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 ITIH1P19827 911 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 ITGALP20701 1170 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 IDSP22304 550 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 CD1CP29017 333 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 STIP1P31948 543 aaKnown RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 MC4RP32245 332 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 FDFT1P37268 417 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 GPR3P46089 330 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 KCNJ1P48048 391 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 CTSCP53634 463 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 PDE1BQ01064 536 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 OASLQ15646 514 aaKnown RBP9.24□□□□□ -0.93
DDX41-209ENST00000508279 CCDC38Q502W7 563 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 FNBP1LQ5T0N5 605 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 KCTD11Q693B1 232 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 ZNF662Q6ZS27 426 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 TAS2R42Q7RTR8 314 aa9.24□□□□□ -0.93
DDX41-209ENST00000508279 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms