RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
PDLIM5-210ENST00000508216 USP54Q70EL1 1684 aa10.74□□□□□ -0.69
PDLIM5-210ENST00000508216 UTYO14607 1347 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR25O00155 361 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 NDUFS8O00217 210 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CLDN4O14493 209 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ACOT8O14734 319 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CIDEAO60543 219 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MED24O75448 989 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 GCNT3O95395 438 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ALPPP05187 535 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CD63P08962 238 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TRIM49P0CI25 452 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TRIM49CP0CI26 452 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ADORA3P0DMS8 318 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CAPGP40121 348 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR143P51810 404 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 NRLP54845 237 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CDH8P55286 799 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MPP1Q00013 466 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 STX4Q12846 297 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MERTKQ12866 999 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 SIX1Q15475 284 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 SSX2Q16385 188 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MAJINQ3KP22 176 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 FBXO31Q5XUX0 539 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR139Q6DWJ6 353 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 PMF1Q6P1K2 205 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TEX261Q6UWH6 196 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ARCQ7LC44 396 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR155Q7Z3F1 870 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CDKL3Q8IVW4 592 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 NAGSQ8N159 534 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF527Q8NB42 609 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 HIPK4Q8NE63 616 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 AGR3Q8TD06 166 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 BSNDQ8WZ55 320 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 APBB2Q92870 758 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 NXNL1Q96CM4 212 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 WBP1Q96G27 269 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MED18Q9BUE0 208 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 NXF2Q9GZY0 626 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 CYP3A43Q9HB55 503 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TMEM39AQ9NV64 488 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 UXTQ9UBK9 157 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF112Q9UJU3 913 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MID2Q9UJV3 735 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TRPC5Q9UL62 973 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 PCDHGB1Q9Y5G3 927 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 U3KQ87 197 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 TNKSO95271 1327 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 RGPD8O14715 1765 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 RGPD5Q99666 1765 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 LTBP4Q8N2S1 1624 aa10.73□□□□□ -0.69
PDLIM5-210ENST00000508216 MYMKA6NI61 221 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 POM121CA8CG34 1229 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 M0R3G1 203 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PPEF2O14830 753 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 VEGFDO43915 354 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 IFNGP01579 166 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 AMHP03971 560 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ACAA1P09110 424 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CTSHP09668 335 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 JUPP14923 745 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TSHRP16473 764 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CYP7A1P22680 504 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RORAP35398 523 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 NUP62P37198 522 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SLC1A3P43003 542 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 METAP2P50579 478 aaKnown RBP eCLIP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RAB25P57735 213 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PUDPQ08623 228 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 STXBP2Q15833 593 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TIGD6Q17RP2 521 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TOR1AIP1Q5JTV8 583 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SEL1L2Q5TEA6 688 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 LRRC66Q68CR7 880 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 KRT39Q6A163 491 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 LAMTOR1Q6IAA8 161 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ARHGAP11AQ6P4F7 1023 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ERICH5Q6P6B1 374 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 VITQ6UXI7 678 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PIWIL3Q7Z3Z3 882 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SNX20Q7Z614 316 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 FJX1Q86VR8 437 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF227Q86WZ6 799 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 FAM217AQ8IXS0 508 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 KRT78Q8N1N4 520 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ZCCHC9Q8N567 271 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 KBTBD8Q8NFY9 601 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms