RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 FGL2Q14314 439 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 C5orf22Q49AR2 442 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 ZFYVE27Q5T4F4 411 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 FAM173BQ6P4H8 233 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 TMEM270Q6UE05 265 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 TAC4Q86UU9 113 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 REXO1L1PQ8IX06 675 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 CMIPQ8IY22 773 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 ZZZ3Q8IYH5 903 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 UBA3Q8TBC4 463 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 SEMA4DQ92854 862 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 ALG14Q96F25 216 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 EEF2KMTQ96G04 330 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 PAGE5Q96GU1 130 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 FAM81BQ96LP2 452 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 FUCA2Q9BTY2 467 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 CDH19Q9H159 772 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 LRRN3Q9H3W5 708 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 RETREG1Q9H6L5 497 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 SYNDIG1Q9H7V2 258 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 FZD3Q9NPG1 666 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 ASNSD1Q9NWL6 643 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 PISDQ9UG56 409 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
NR1I3-224ENST00000507215 NAALADL1Q9UQQ1 740 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 MTMR6Q9Y217 621 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 LOXL2Q9Y4K0 774 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 OR51B4Q9Y5P0 310 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 FADS3Q9Y5Q0 445 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 UNC13CQ8NB66 2214 aa6.78□□□□□ -1.32
NR1I3-224ENST00000507215 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
NR1I3-224ENST00000507215 SCN8AQ9UQD0 1980 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 YY2O15391 372 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 P4HA2O15460 535 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 HSF2BPO75031 334 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 RPLP0P05388 317 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 CENPBP07199 599 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 CTSLP07711 333 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 RHOCP08134 193 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 CTSEP14091 401 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 MAN1A1P33908 653 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 RGS7P49802 495 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ADKP55263 362 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 MC1RQ01726 317 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 GCNT1Q02742 428 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ZFP36L1Q07352 338 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ADCY2Q08462 1091 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 EIF4EBP2Q13542 120 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 USP10Q14694 798 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 PCOLCEQ15113 449 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ZCWPW2Q504Y3 356 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ZNF542PQ5EBM4 170 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 EFHC1Q5JVL4 640 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 OR6B2Q6IFH4 312 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 FBXL22Q6P050 247 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 C22orf39Q6P5X5 142 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 LRRC31Q6UY01 552 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 TMEM110Q86TL2 294 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 LGI4Q8N135 537 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 OR5AN1Q8NGI8 311 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 C9orf43Q8TAL5 461 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 KLK6Q92876 244 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ISG20Q96AZ6 181 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 MYEOVQ96EZ4 313 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 NT5C1BQ96P26 610 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 TSG101Q99816 390 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 DPYSL5Q9BPU6 564 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 HEPHQ9BQS7 1158 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 LRRC61Q9BV99 259 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ASPSCR1Q9BZE9 553 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 MIS12Q9H081 205 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 FAM204AQ9H8W3 233 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 METTL14Q9HCE5 456 aaKnown RBP6.77□□□□□ -1.33
NR1I3-224ENST00000507215 TMPRSS11EQ9UL52 423 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
NR1I3-224ENST00000507215 ICE1Q9Y2F5 2266 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 PRAMEF33A0A0G2JMD5 474 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 ILVBLA1L0T0 632 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 PRSS38A1L453 326 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 NUDT21O43809 227 aaKnown RBP6.76□□□□□ -1.33
NR1I3-224ENST00000507215 PRAMEF10O60809 474 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 GCATO75600 419 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 CNOT4O95628 575 aaKnown RBP6.76□□□□□ -1.33
NR1I3-224ENST00000507215 F9P00740 461 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 CLEC2LP0C7M8 214 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 TSHRP16473 764 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 CASP1P29466 404 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 GPD2P43304 727 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 SERPINH1P50454 418 aaKnown RBP6.76□□□□□ -1.33
NR1I3-224ENST00000507215 HK3P52790 923 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 TMPRSS15P98073 1019 aa6.76□□□□□ -1.33
NR1I3-224ENST00000507215 FKBP3Q00688 224 aaKnown RBP6.76□□□□□ -1.33
NR1I3-224ENST00000507215 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
NR1I3-224ENST00000507215 TGIF1Q15583 401 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms