RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 OR6C4Q8NGE1 309 aa19.61■□□□□ 0.73
SNX25-204ENST00000506896 ZNF514Q96K75 400 aaPredicted RBP19.61■□□□□ 0.73
SNX25-204ENST00000506896 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.61■□□□□ 0.73
SNX25-204ENST00000506896 TAAR2Q9P1P5 351 aa19.61■□□□□ 0.73
SNX25-204ENST00000506896 SIRPGQ9P1W8 387 aa19.61■□□□□ 0.73
SNX25-204ENST00000506896 RP1P56715 2156 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 EME2A4GXA9 379 aaPredicted RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 FAM149AA5PLN7 773 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 RALBP11234 206 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 MSH3P20585 1137 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 AK4P27144 223 aaPredicted RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 AKT1P31749 480 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 E2F1Q01094 437 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 ACVR1Q04771 509 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 DHX34Q14147 1143 aaKnown RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 ZNF534Q76KX8 674 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 CHST15Q7LFX5 561 aaPredicted RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 CACTIN-AS1Q8N1I8 211 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 NXPE1Q8N323 547 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 GPR156Q8NFN8 814 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 OR13J1Q8NGT2 312 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 SGSM3Q96HU1 749 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 MRM3Q9HC36 420 aaKnown RBP19.6■□□□□ 0.73
SNX25-204ENST00000506896 GULP1Q9UBP9 304 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 ZMIZ1Q9ULJ6 1067 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 PADI4Q9UM07 663 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 PRKAB1Q9Y478 270 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 ST14Q9Y5Y6 855 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 BPTFQ12830 3046 aa19.6■□□□□ 0.73
SNX25-204ENST00000506896 TRBV5-4A0A0C4DH59 114 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 B4DGG1 531 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CFAP99D6REC4 459 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CCL22O00626 93 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 KCNJ13O60928 360 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 MYF5P13349 255 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 ACP5P13686 325 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 VCLP18206 1134 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CLCNKAP51800 687 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 TERF1P54274 439 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CLDN6P56747 220 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 KCTD19Q17RG1 926 aaPredicted RBP19.59■□□□□ 0.73
SNX25-204ENST00000506896 ZRANB3Q5FWF4 1079 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 ANKRD22Q5VYY1 191 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 AFTPHQ6ULP2 937 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CRTC3Q6UUV7 619 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 TRAPPC5Q8IUR0 188 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 NAT8LQ8N9F0 302 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 KYQ8NBH2 561 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 ZDHHC1Q8WTX9 485 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNX25-204ENST00000506896 DCUN1D1Q96GG9 259 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 COPS8Q99627 209 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 TIMM29Q9BSF4 260 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 CHRAC1Q9NRG0 131 aa19.59■□□□□ 0.73
SNX25-204ENST00000506896 SPATS2LQ9NUQ6 558 aaKnown RBP19.59■□□□□ 0.73
SNX25-204ENST00000506896 PCYT1BQ9Y5K3 369 aaPredicted RBP19.59■□□□□ 0.73
SNX25-204ENST00000506896 DNMT3AQ9Y6K1 912 aaPredicted RBP19.59■□□□□ 0.73
SNX25-204ENST00000506896 ANKRD11Q6UB99 2663 aaPredicted RBP19.58■□□□□ 0.73
SNX25-204ENST00000506896 CCDC78A2IDD5 438 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 KLHL33A6NCF5 533 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 TRABD2BA6NFA1 517 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 TAF4O00268 1085 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 NOBOXO60393 691 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 TMEM63AO94886 807 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ZNF7P17097 686 aaPredicted RBP19.58■□□□□ 0.72
SNX25-204ENST00000506896 ACRV1P26436 265 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 CA5AP35218 305 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ARSDP51689 593 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 PRAMEP78395 509 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 INSM1Q01101 510 aaPredicted RBP19.58■□□□□ 0.72
SNX25-204ENST00000506896 INSCQ1MX18 579 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 C14orf28Q4W4Y0 310 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 HOOK3Q86VS8 718 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 JAMLQ86YT9 394 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ZNF547Q8IVP9 402 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 RASGEF1AQ8N9B8 481 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 SPATA4Q8NEY3 305 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 IFI44Q8TCB0 444 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 TTC1Q99614 292 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 KIFC1Q9BW19 673 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ZDHHC3Q9NYG2 299 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 PLEKHM1Q9Y4G2 1056 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ACACAQ13085 2346 aa19.58■□□□□ 0.72
SNX25-204ENST00000506896 ARHGEF17Q96PE2 2063 aaPredicted RBP19.57■□□□□ 0.72
SNX25-204ENST00000506896 MAGEB16A2A368 324 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 CPED1A4D0V7 1026 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 SMAPO00193 183 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 DNALI1O14645 258 aaPredicted RBP19.57■□□□□ 0.72
SNX25-204ENST00000506896 SLC2A4P14672 509 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 JUPP14923 745 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 MGAT1P26572 445 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 CRADDP78560 199 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 CKAP4Q07065 602 aaKnown RBP19.57■□□□□ 0.72
SNX25-204ENST00000506896 HLTFQ14527 1009 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNX25-204ENST00000506896 RNASEH2BQ5TBB1 312 aaKnown RBP19.57■□□□□ 0.72
SNX25-204ENST00000506896 HES3Q5TGS1 186 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 LYPLAL1Q5VWZ2 237 aa19.57■□□□□ 0.72
SNX25-204ENST00000506896 GUSBP11Q6P575 273 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms