RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 BASP1P80723 227 aaKnown RBP17.58■□□□□ 0.41
SMN1-204ENST00000506163 KIF26BQ2KJY2 2108 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 LDLRAP1Q5SW96 308 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 CCDC137Q6PK04 289 aaKnown RBP17.58■□□□□ 0.41
SMN1-204ENST00000506163 UNQ6494/PRO21346Q6UXR6 183 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 PPP1R21Q6ZMI0 780 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 LRRTM4Q86VH4 590 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 PIANPQ8IYJ0 282 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 CACTIN-AS1Q8N1I8 211 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 Q8N9G6 341 aaPredicted RBP17.58■□□□□ 0.41
SMN1-204ENST00000506163 OR13J1Q8NGT2 312 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 STYXQ8WUJ0 223 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 ABCG4Q9H172 646 aa17.58■□□□□ 0.41
SMN1-204ENST00000506163 EIF2B3Q9NR50 452 aaKnown RBP17.58■□□□□ 0.41
SMN1-204ENST00000506163 SCHIP1Q9P0W5 487 aaPredicted RBP17.58■□□□□ 0.41
SMN1-204ENST00000506163 DMXL2Q8TDJ6 3036 aa17.58■□□□□ 0.4
SMN1-204ENST00000506163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.57■□□□□ 0.4
SMN1-204ENST00000506163 TRBV5-4A0A0C4DH59 114 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 OR51F1A6NGY5 319 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 KMOO15229 486 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 NUDT21O43809 227 aaKnown RBP17.57■□□□□ 0.4
SMN1-204ENST00000506163 PHF2O75151 1096 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 KRT14P02533 472 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 TCP1P17987 556 aaKnown RBP17.57■□□□□ 0.4
SMN1-204ENST00000506163 HADHAP40939 763 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 CLCNKAP51800 687 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 PDX1P52945 283 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 GPS1Q13098 491 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 KCNJ11Q14654 390 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 ANKRD22Q5VYY1 191 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 IYDQ6PHW0 289 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 TMEM220Q6QAJ8 160 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 XKR5Q6UX68 686 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 C4orf22Q6V702 233 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 ZNF438Q7Z4V0 828 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 SNX20Q7Z614 316 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 SFRP1Q8N474 314 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 BEND7Q8N7W2 519 aaPredicted RBP17.57■□□□□ 0.4
SMN1-204ENST00000506163 SLC37A2Q8TED4 501 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 SGF29Q96ES7 293 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 NAP1L3Q99457 506 aaPredicted RBP17.57■□□□□ 0.4
SMN1-204ENST00000506163 DNAJC16Q9Y2G8 782 aa17.57■□□□□ 0.4
SMN1-204ENST00000506163 A0A1W2PNU3 283 aaPredicted RBP17.56■□□□□ 0.4
SMN1-204ENST00000506163 OR2AG2A6NM03 316 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 SNX2O60749 519 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 PNLIPP16233 465 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 MAGEA6P43360 314 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 OR1D5P58170 312 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 CRADDP78560 199 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 FAM83HQ6ZRV2 1179 aaPredicted RBP17.56■□□□□ 0.4
SMN1-204ENST00000506163 DET1Q7L5Y6 550 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 TMPRSS9Q7Z410 1059 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 SPRED1Q7Z699 444 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 TRAPPC5Q8IUR0 188 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 NXPE1Q8N323 547 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 OR6C4Q8NGE1 309 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 RANBP9Q96S59 729 aa17.56■□□□□ 0.4
SMN1-204ENST00000506163 NAPGQ99747 312 aaPredicted RBP17.56■□□□□ 0.4
SMN1-204ENST00000506163 CCDC162PA2VCL2 907 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 CSO75390 466 aaKnown RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 POP7O75817 140 aaKnown RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 RPLP0P05388 317 aaKnown RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 BRAFP15056 766 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ADRA1DP25100 572 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 SESN2P58004 480 aaPredicted RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 NR1D2Q14995 579 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 INSCQ1MX18 579 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ISXQ2M1V0 245 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 TSTD2Q5T7W7 516 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ZNF761Q86XN6 746 aaPredicted RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 CCNJLQ8IV13 435 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 CPT1BQ92523 772 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 TIMM29Q9BSF4 260 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 DDX47Q9H0S4 455 aaKnown RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 LRRN3Q9H3W5 708 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 CHRAC1Q9NRG0 131 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 CRLS1Q9UJA2 301 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ATXN7L1Q9ULK2 861 aaPredicted RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 TCAF1Q9Y4C2 921 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 EPG5Q9HCE0 2579 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 APC2O95996 2303 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 IGLV3-16A0A075B6K0 115 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 PRAMEF33A0A0G2JMD5 474 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 HEATR9A2RTY3 570 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 TAF4O00268 1085 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 AVILO75366 819 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 TMEM63AO94886 807 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 PROS1P07225 676 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 F3P13726 295 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 TPSB2P20231 275 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 MSH3P20585 1137 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ITGALP20701 1170 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 RPL10P27635 214 aaKnown RBP17.55■□□□□ 0.4
SMN1-204ENST00000506163 AKT1P31749 480 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 FOXN2P32314 431 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 FNTAP49354 379 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 CFHR1Q03591 330 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 ACVR1Q04771 509 aa17.55■□□□□ 0.4
SMN1-204ENST00000506163 GTF2H3Q13889 308 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms