RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 F10P00742 488 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 HLA-DRAP01903 254 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 HRGP04196 525 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 RPN1P04843 607 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KRT18P05783 430 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PYGMP11217 842 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 P4HA1P13674 534 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 GAP43P17677 238 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 IL4RP24394 825 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TEAD1P28347 426 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ERCC5P28715 1186 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ACVRL1P37023 503 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SLC19A1P41440 591 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KIR2DL3P43628 341 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PPM1FP49593 454 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 RGS7P49802 495 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SUOXP51687 545 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ANAPC15P60006 121 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ARG2P78540 354 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TNK1Q13470 666 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 OLIG2Q13516 323 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PEX6Q13608 980 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ALCAMQ13740 583 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 LRP8Q14114 963 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KIR2DS5Q14953 304 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 FLYWCH1Q4VC44 716 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KRTCAP3Q53RY4 240 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 EMC4Q5J8M3 183 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 RNFT1Q5M7Z0 435 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ATG9BQ674R7 924 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 RETSATQ6NUM9 610 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 CYB5D1Q6P9G0 228 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TFAP2DQ7Z6R9 452 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SLC9B2Q86UD5 537 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TRIM74Q86UV6 250 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF354CQ86Y25 554 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 FAM20CQ8IXL6 584 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PLD6Q8N2A8 252 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 DEPDC4Q8N2C3 294 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 GUF1Q8N442 669 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 LZTR1Q8N653 840 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 AMER2Q8N7J2 671 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ATP6V0D2Q8N8Y2 350 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 NECAB1Q8N987 351 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 OR8K5Q8NH50 307 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 OR1L3Q8NH93 324 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 FAM222BQ8WU58 562 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 CPT1BQ92523 772 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 UBXN4Q92575 508 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SNX21Q969T3 373 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 FAM149B1Q96BN6 582 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ZMYND19Q96E35 227 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 EEF2KMTQ96G04 330 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 THOC3Q96J01 351 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PPM1MQ96MI6 270 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 FRMD6Q96NE9 622 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 HERPUD2Q9BSE4 406 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TRIM7Q9C029 511 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TTYH3Q9C0H2 523 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 NOL6Q9H6R4 1146 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SP110Q9HB58 689 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PHPT1Q9NRX4 125 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 SLC22A11Q9NSA0 550 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 MPP6Q9NZW5 540 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 VPS9D1Q9Y2B5 631 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PADI2Q9Y2J8 665 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM98Q9Y2Y6 226 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PTRH2Q9Y3E5 179 aaKnown RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 NPFFR2Q9Y5X5 522 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 TENM3Q9P273 2699 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 CCDC66A2RUB6 948 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 NPIPA5E9PKD4 350 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 IKBKBO14920 756 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 DDX3YO15523 660 aaKnown RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 SMPD2O60906 423 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 GADD45BO75293 160 aaPredicted RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 MTA2O94776 668 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 PRAMEF1O95521 474 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 TSPAN12O95859 305 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 WDPCPO95876 746 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 PGRP06401 933 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 SETSIPP0DME0 302 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 CBSLP0DN79 551 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 VSIG8P0DPA2 414 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 ABOP16442 354 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 XRCC1P18887 633 aaPredicted RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 ITGAXP20702 1163 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 TNFAIP3P21580 790 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 MMP11P24347 488 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 CBSP35520 551 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 FOLR3P41439 243 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 COMPP49747 757 aaPredicted RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 CYP2J2P51589 502 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 NR0B1P51843 470 aaKnown RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 AP3M2P53677 418 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 NUP107P57740 925 aa3.24□□□□□ -1.89
TCOF1-208ENST00000506063 SNRPD1P62314 119 aaKnown RBP3.24□□□□□ -1.89
TCOF1-208ENST00000506063 NUCB2P80303 420 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms