RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 NEUROD6Q96NK8 337 aa3.73□□□□□ -1.81
CHD1-203ENST00000505657 POLR3CQ9BUI4 534 aaPredicted RBP3.73□□□□□ -1.81
CHD1-203ENST00000505657 SIL1Q9H173 461 aa3.73□□□□□ -1.81
CHD1-203ENST00000505657 LRMDAQ9H2I8 198 aa3.73□□□□□ -1.81
CHD1-203ENST00000505657 TCF7L2Q9NQB0 619 aa3.73□□□□□ -1.81
CHD1-203ENST00000505657 UBA2Q9UBT2 640 aaPredicted RBP3.73□□□□□ -1.81
CHD1-203ENST00000505657 TMEM184BQ9Y519 407 aaPredicted RBP3.73□□□□□ -1.81
CHD1-203ENST00000505657 A0A1W2PS18 150 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 FSD2A1L4K1 749 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 CAPN9O14815 690 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 VILLO15195 856 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 ZBED4O75132 1171 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 CRYAAP02489 173 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TUBBP07437 444 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 CETPP11597 493 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TMEM11P17152 192 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 PON1P27169 355 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 IL15P40933 162 aaPredicted RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 DRG2P55039 364 aaKnown RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 CD81P60033 236 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 PITX1P78337 314 aaPredicted RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 RPL24P83731 157 aaKnown RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 CRYMQ14894 314 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 SIRPB2Q5JXA9 342 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 RARS2Q5T160 578 aaKnown RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 ZNF852Q6ZMS4 543 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 Q6ZTC4 211 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 ZNF329Q86UD4 541 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TICAM1Q8IUC6 712 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 ADGRF2Q8IZF7 708 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 EMC1Q8N766 993 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 SLC24A4Q8NFF2 622 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 GSDMBQ8TAX9 411 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TMEM255BQ8WV15 326 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 PHF21AQ96BD5 680 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 ZNF583Q96ND8 569 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 SEMA3CQ99985 751 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 MMP28Q9H239 520 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 GHITMQ9H3K2 345 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TAAR2Q9P1P5 351 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
CHD1-203ENST00000505657 TBC1D29Q9UFV1 150 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 TSPYL4Q9UJ04 414 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 PNMA2Q9UL42 364 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 NENFQ9UMX5 172 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 CMAHPQ9Y471 501 aa3.72□□□□□ -1.81
CHD1-203ENST00000505657 PRAG1Q86YV5 1406 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 TMEM8BA6NDV4 472 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 P2RY10O00398 339 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 HIST1H2ABP04908 130 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 HIST1H2ADP20671 130 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 ARCN1P48444 511 aaKnown RBP3.71□□□□□ -1.82
CHD1-203ENST00000505657 PPP2R2BQ00005 443 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 LRMPQ12912 555 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 MVPQ14764 893 aaKnown RBP3.71□□□□□ -1.82
CHD1-203ENST00000505657 DLG2Q15700 870 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 GDPD4Q6W3E5 623 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
CHD1-203ENST00000505657 C4orf50Q6ZRC1 276 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 MARK2Q7KZI7 788 aaKnown RBP3.71□□□□□ -1.82
CHD1-203ENST00000505657 HIST3H2AQ7L7L0 130 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 SZRD1Q7Z422 152 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 HACE1Q8IYU2 909 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 SCYL3Q8IZE3 742 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 PGAM5Q96HS1 289 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 NEURL2Q9BR09 285 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 MBNL1Q9NR56 388 aaKnown RBP3.71□□□□□ -1.82
CHD1-203ENST00000505657 TCP11L1Q9NUJ3 509 aa3.71□□□□□ -1.82
CHD1-203ENST00000505657 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 CDRT15L2A8MXV6 281 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 TMEM189-UBE2V1I3L0A0 370 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 J3QR06 171 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 PLK4O00444 970 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 GRID2O43424 1007 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 GM2AP17900 193 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 HOXA13P31271 388 aaPredicted RBP3.7□□□□□ -1.82
CHD1-203ENST00000505657 HOXD13P35453 343 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 MMP14P50281 582 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 SUOXP51687 545 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 MC1RQ01726 317 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 DUSP28Q4G0W2 176 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 C9orf50Q5SZB4 431 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 HYIQ5T013 277 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 PLXDC2Q6UX71 529 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 NFE4Q86UQ8 179 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 AACSQ86V21 672 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 TEX11Q8IYF3 940 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 GCSAMQ8N6F7 178 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 LMNTD1Q8N9Z9 388 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 DNAAF4Q8WXU2 420 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 FAM120BQ96EK7 910 aaKnown RBP3.7□□□□□ -1.82
CHD1-203ENST00000505657 OXNAD1Q96HP4 312 aaPredicted RBP3.7□□□□□ -1.82
CHD1-203ENST00000505657 DDOQ99489 341 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 NCAPGQ9BPX3 1015 aa3.7□□□□□ -1.82
CHD1-203ENST00000505657 TREX2Q9BQ50 279 aaPredicted RBP3.7□□□□□ -1.82
CHD1-203ENST00000505657 TRMT61BQ9BVS5 477 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms