RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ARF5P84085 180 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 PPP2R2BQ00005 443 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ACSM1Q08AH1 577 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TEFQ10587 303 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ST3GAL1Q11201 340 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 CBX3Q13185 183 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ITGA7Q13683 1181 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF268Q14587 947 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 PROSER3Q2NL68 480 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM91A1Q658Y4 838 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 RAB12Q6IQ22 244 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TEX38Q6PEX7 206 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 PAPD4Q6PIY7 484 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 GBP6Q6ZN66 633 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TPRG1Q6ZUI0 275 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 MTSS1LQ765P7 747 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ABI3BPQ7Z7G0 1075 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 AMIGO2Q86SJ2 522 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM173Q86WV6 379 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 DZIP1Q86YF9 867 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF619Q8N2I2 560 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TEX45Q8NA69 505 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 KDM1BQ8NB78 822 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 C9orf43Q8TAL5 461 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPATA20Q8TB22 786 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 GRAPLQ8TC17 118 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM163Q8TC26 289 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 HM13Q8TCT9 377 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TAS1R2Q8TE23 839 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC35F5Q8WV83 523 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 EXT2Q93063 718 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SARAFQ96BY9 339 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 NXNL1Q96CM4 212 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ERLEC1Q96DZ1 483 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 AK8Q96MA6 479 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 INTS14Q96SY0 518 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 WDR83Q9BRX9 315 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 UTP14AQ9BVJ6 771 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SCNM1Q9BWG6 230 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 IL17RBQ9NRM6 502 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 TRMT1Q9NXH9 659 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ERAP1Q9NZ08 941 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 VPS18Q9P253 973 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 HEY2Q9UBP5 337 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 SERGEFQ9UGK8 458 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 ACSL5Q9ULC5 683 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 KCNK7Q9Y2U2 307 aa3.86□□□□□ -1.79
TRAPPC13-208ENST00000505553 A0A1W2PRV1 198 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 WIPF3A6NGB9 483 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 EIF4E1BA6NMX2 242 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 CLIC2O15247 247 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 NDUFS4O43181 175 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 B3GALNT1O75752 331 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 CAMTA2O94983 1202 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 ADRA2CP18825 462 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SOAT1P35610 550 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 PLA2G5P39877 138 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 CASP3P42574 277 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 MTHFRP42898 656 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SNU13P55769 128 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMPRSS3P57727 454 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 RPS13P62277 151 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPOCK1Q08629 439 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 C17orf67Q0P5P2 114 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 RPA4Q13156 261 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 MAD2L1Q13257 205 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 NR1D2Q14995 579 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 RRS1Q15050 365 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 VWC2Q2TAL6 325 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 ATP13A5Q4VNC0 1218 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 C6orf10Q5SRN2 563 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 DCST1Q5T197 706 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SHEQ5VZ18 495 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZDHHC20Q5W0Z9 365 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM198BQ6UWH4 519 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZBTB49Q6ZSB9 765 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 CATSPER4Q7RTX7 472 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 DSG4Q86SJ6 1040 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 C4orf19Q8IY42 314 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 GALNT16Q8N428 558 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 NHLRC2Q8NBF2 726 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC4A11Q8NBS3 891 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPSB1Q96BD6 273 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 PDLIM5Q96HC4 596 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 GFM1Q96RP9 751 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 PARK7Q99497 189 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 SEPHS2Q99611 448 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 INPP5KQ9BT40 448 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 MOV10L1Q9BXT6 1211 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 XPO4Q9C0E2 1151 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 RAD21L1Q9H4I0 556 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 KLHL31Q9H511 634 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 THAP9Q9H5L6 903 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 TASP1Q9H6P5 420 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 ESRP2Q9H6T0 727 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 AAMDCQ9H7C9 122 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 PPP1R3EQ9H7J1 279 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 EQTNQ9NQ60 294 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms