RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 RFXAPO00287 272 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 ME2P23368 584 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 SLC12A2P55011 1212 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 DUSP6Q16828 381 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 ARMC12Q5T9G4 340 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 LPCAT2Q7L5N7 544 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 PEX13Q92968 403 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 NXNL1Q96CM4 212 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 RSPRY1Q96DX4 576 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 NMRAL1Q9HBL8 299 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 FAIMQ9NVQ4 179 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 ACOT9Q9Y305 439 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 RNF11Q9Y3C5 154 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 MTF2Q9Y483 593 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 GOLGA8QA0A0J9YX86 632 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 GOLGA8OA6NCC3 632 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 GOLGA8NF8WBI6 632 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 H0YJX3 145 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 TK2O00142 265 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 H2AFYO75367 372 aaKnown RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 PGLSO95336 258 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 PABPC1P11940 636 aaKnown RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 LPOP22079 712 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 VIPR2P41587 438 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 CLCN5P51795 746 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 TXNL4AP83876 142 aaKnown RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 BCL2L1Q07817 233 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 HECTD2Q5U5R9 776 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 TTC30BQ8N4P2 665 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 SREK1Q8WXA9 508 aaKnown RBP13.11□□□□□ -0.31
CCSER1-205ENST00000505073 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 WDR41Q9HAD4 459 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 TBC1D14Q9P2M4 693 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 SLCO3A1Q9UIG8 710 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 ANKRD6Q9Y2G4 727 aa13.11□□□□□ -0.31
CCSER1-205ENST00000505073 CFLARO15519 480 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 IGSF6O95976 241 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ENO3P13929 434 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF26P17031 533 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 EPHA3P29320 983 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 WEE1P30291 646 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 CDKN1CP49918 316 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 POU4F1Q01851 419 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 CBX3Q13185 183 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 TRPC4APQ8TEL6 797 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 PIH1D2Q8WWB5 315 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 EME1Q96AY2 570 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 EPS15L1Q9UBC2 864 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ZNHIT2Q9UHR6 403 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 G3V2L1 256 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 NEMP1O14524 444 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ACOT8O14734 319 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 H6PDO95479 791 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 PPARGP37231 505 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 DPP6P42658 865 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 POLD2P49005 469 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 CDKN2DP55273 166 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 HERC3Q15034 1050 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 C22orf39Q6P5X5 142 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 RNF148Q8N7C7 305 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF597Q96LX8 424 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF385DQ9H6B1 395 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 WDR55Q9H6Y2 383 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 LIN28AQ9H9Z2 209 aaKnown RBP13.1□□□□□ -0.31
CCSER1-205ENST00000505073 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 ACSS2Q9NR19 701 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 C2orf16Q68DN1 1984 aa13.1□□□□□ -0.31
CCSER1-205ENST00000505073 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.09□□□□□ -0.31
CCSER1-205ENST00000505073 STX7O15400 261 aaKnown RBP13.09□□□□□ -0.31
CCSER1-205ENST00000505073 SBK3P0C264 359 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 CD97P48960 835 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
CCSER1-205ENST00000505073 PLOD1Q02809 727 aaPredicted RBP13.09□□□□□ -0.31
CCSER1-205ENST00000505073 LSM12Q3MHD2 195 aaKnown RBP13.09□□□□□ -0.31
CCSER1-205ENST00000505073 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 ZNF549Q6P9A3 640 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 ELMSAN1Q6PJG2 1045 aa13.09□□□□□ -0.31
CCSER1-205ENST00000505073 Q6ZNX1 250 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms