RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 GPR39O43194 453 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A9O60656 530 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 USP1O94782 785 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 SLC25A14O95258 325 aaPredicted RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 ASMTLO95671 621 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TTC4O95801 387 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 GOT2P00505 430 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 POLBP06746 335 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 SYPP08247 313 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 HOXC4P09017 264 aaPredicted RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A6P19224 532 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A1P22309 533 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A4P22310 534 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 PSMA3P25788 255 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A3P35503 534 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A5P35504 534 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 PI4KAP42356 2102 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 CARSP49589 748 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 CACNG1Q06432 222 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 NFATC2Q13469 925 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 FASTKD3Q14CZ7 662 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 KIF19Q2TAC6 998 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ANKRD20A4Q4UJ75 823 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TPRG1LQ5T0D9 272 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 KIAA0930Q6ICG6 404 aaPredicted RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 DOK6Q6PKX4 331 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ENPP7Q6UWV6 458 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 MACC1Q6ZN28 852 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 MICALCLQ6ZW33 695 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TAS2R42Q7RTR8 314 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 GPR155Q7Z3F1 870 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 SNX20Q7Z614 316 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TMEM135Q86UB9 458 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 CCNJLQ8IV13 435 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ANKMY2Q8IV38 441 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 IGDCC3Q8IVU1 814 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ZBED8Q8IZ13 594 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 SLC22A18ASQ8N1D0 253 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 OTUD6BQ8N6M0 293 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 PNPLA1Q8N8W4 532 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
NUP54-203ENST00000504173 FBXO36Q8NEA4 188 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 BTN2A2Q8WVV5 523 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.93□□□□□ -0.82
NUP54-203ENST00000504173 ULK4Q96C45 1275 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 COX14Q96I36 57 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 WDR92Q96MX6 357 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 VPS35Q96QK1 796 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 FMO2Q99518 471 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 EBNA1BP2Q99848 306 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 TRIM56Q9BRZ2 755 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 NAT9Q9BTE0 207 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 LGR4Q9BXB1 951 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 FAM96AQ9H5X1 160 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A7Q9HAW7 530 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A10Q9HAW8 530 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 UGT1A8Q9HAW9 530 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ARFGAP3Q9NP61 516 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 RRAGDQ9NQL2 400 aaPredicted RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 GPR27Q9NS67 375 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ZDHHC18Q9NUE0 388 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 SMOXQ9NWM0 555 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 KLQ9UEF7 1012 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 ZC3H7BQ9UGR2 993 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 MOSPD1Q9UJG1 213 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 CNOT6Q9ULM6 557 aaKnown RBP9.93□□□□□ -0.82
NUP54-203ENST00000504173 SNX11Q9Y5W9 270 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 TEX264Q9Y6I9 313 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 CREBBPQ92793 2442 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 DOPEY2Q9Y3R5 2298 aa9.93□□□□□ -0.82
NUP54-203ENST00000504173 FBN2P35556 2912 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 COL5A1P20908 1838 aaPredicted RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 SPTY2D1-AS1A0A0U1RR47 76 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 ZCWPW2A0A1B0GU75 182 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 PYCARD-AS1I3L0S3 204 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 DKK1O94907 266 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 VAPBO95292 243 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 AKT1P31749 480 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 FOXN2P32314 431 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 CTSKP43235 329 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 ATXN3P54252 364 aaPredicted RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 BNC1Q01954 994 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 FZD2Q14332 565 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 CRYMQ14894 314 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 SMAD1Q15797 465 aaKnown RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 GPR33Q49SQ1 333 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 FASTKD1Q53R41 847 aaKnown RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 SPANXN3Q5MJ09 141 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 LDLRAP1Q5SW96 308 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 ZNF648Q5T619 568 aaPredicted RBP9.92□□□□□ -0.82
NUP54-203ENST00000504173 GPRC6AQ5T6X5 926 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 CEP128Q6ZU80 1094 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 SLCO6A1Q86UG4 719 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 PARGQ86W56 976 aa9.92□□□□□ -0.82
NUP54-203ENST00000504173 SERPINA9Q86WD7 417 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms