RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 YBX2Q9Y2T7 364 aaKnown RBP21.12■□□□□ 0.97
UBE2D3-216ENST00000503742 A0A088AWK7 358 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 TTC34A8MYJ7 566 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 ADH5P11766 374 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 CLCQ05315 142 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 KPNB1Q14974 876 aaKnown RBP21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 HERC3Q15034 1050 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 DUSP6Q16828 381 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 TRIM68Q6AZZ1 485 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 TMC5Q6UXY8 1006 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 CLDN19Q8N6F1 224 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 RP9Q8TA86 221 aaKnown RBP21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 CLPTM1LQ96KA5 538 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 FAM161BQ96MY7 647 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 PLEKHG4BQ96PX9 1271 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 C2orf16Q68DN1 1984 aa21.11■□□□□ 0.97
UBE2D3-216ENST00000503742 TSPAN11A1L157 253 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 ITGAXP20702 1163 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 VIPR2P41587 438 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 LCP2Q13094 533 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 TCEAL5Q5H9L2 206 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 ZDHHC20Q5W0Z9 365 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 RFLNAQ6ZTI6 216 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 ENDOVQ8N8Q3 282 aaKnown RBP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 TRPC4APQ8TEL6 797 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 NAT14Q8WUY8 206 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 MID1IP1Q9NPA3 183 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 NKX1-2Q9UD57 310 aaPredicted RBP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 SRPRAP08240 638 aaKnown RBP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 NNMTP40261 264 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 SPINT3P49223 89 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 DGKGP49619 791 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 KCNC3Q14003 757 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 KHDC1Q4VXA5 237 aaKnown RBP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 ACSBG2Q5FVE4 666 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 FAM219BQ5XKK7 198 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 KANK2Q63ZY3 851 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 LARP4Q71RC2 724 aaKnown RBP eCLIP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 C12orf40Q86WS4 652 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 ZNF483Q8TF39 744 aaPredicted RBP21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 PBXIP1Q96AQ6 731 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 MARK4Q96L34 752 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 SLC7A8Q9UHI5 535 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 DNAJC15Q9Y5T4 150 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 PIKFYVEQ9Y2I7 2098 aa21.1■□□□□ 0.97
UBE2D3-216ENST00000503742 AZIN1O14977 448 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 LEFTY1O75610 366 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 SLC25A14O95258 325 aaPredicted RBP21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 ASLP04424 464 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 AGTR2P50052 363 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 CUL3Q13618 768 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 SHHQ15465 462 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 TGFBIQ15582 683 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 LRRC73Q5JTD7 316 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 GPRC6AQ5T6X5 926 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 SBSNQ6UWP8 590 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 NET1Q7Z628 596 aaPredicted RBP21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 SNX32Q86XE0 403 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 NPAS3Q8IXF0 933 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 VN1R2Q8NFZ6 395 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 WFIKKN2Q8TEU8 576 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 CERS4Q9HA82 394 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 LATS2Q9NRM7 1088 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 MRGBPQ9NV56 204 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 ZDHHC3Q9NYG2 299 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 NUDT4Q9NZJ9 180 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 PCTPQ9UKL6 214 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 SLC27A6Q9Y2P4 619 aa21.09■□□□□ 0.97
UBE2D3-216ENST00000503742 NCF1BA6NI72 391 aaPredicted RBP21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 NCF1CA8MVU1 366 aaPredicted RBP21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ADH1CP00326 375 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 NCF1P14598 390 aaPredicted RBP21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ARSAP15289 507 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 NSG1P42857 185 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 NRIP1P48552 1158 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 FOXA1P55317 472 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 PPP1R3AQ16821 1122 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ATP13A5Q4VNC0 1218 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 FBXO48Q5FWF7 155 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 FAM78AQ5JUQ0 283 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 PGM2L1Q6PCE3 622 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ADAMTSL2Q86TH1 951 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ETFBKMTQ8IXQ9 262 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 C19orf60Q96EN9 201 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 SFXN1Q9H9B4 322 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 ANKRD12Q6UB98 2062 aa21.08■□□□□ 0.97
UBE2D3-216ENST00000503742 IGLV3-16A0A075B6K0 115 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 A0A1B0GTL3 188 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 LMNAP02545 664 aaKnown RBP21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 CTSLP07711 333 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 ZNF30P17039 623 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 ITGB6P18564 788 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 CYLC2Q14093 348 aaPredicted RBP21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 ARSIQ5FYB1 569 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 C3orf30Q96M34 536 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 ASB16Q96NS5 453 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 DCLRE1BQ9H816 532 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 SEMA4BQ9NPR2 832 aaPredicted RBP21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 CD274Q9NZQ7 290 aa21.08■□□□□ 0.96
UBE2D3-216ENST00000503742 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms