RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PPHLN1Q8NEY8 458 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 MAPK15Q8TD08 544 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 HEXDCQ8WVB3 486 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC74AQ96AQ1 378 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF514Q96K75 400 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 RUNDC3BQ96NL0 473 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC3Q9BQI4 270 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 KLC4Q9NSK0 619 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 BFARQ9NZS9 450 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 TBC1D29Q9UFV1 150 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 SLC23A2Q9UGH3 650 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 IGLV3-16A0A075B6K0 115 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC78A2IDD5 438 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 A6NCN8 305 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC188H7C350 402 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 KCNJ13O60928 360 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 TMEM63AO94886 807 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 EML2O95834 649 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 PTGIRP43119 386 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 MAZP56270 477 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 B4GALNT1Q00973 533 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 PPP1R7Q15435 360 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 INSCQ1MX18 579 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ZRANB3Q5FWF4 1079 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ANKRD22Q5VYY1 191 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ARMC3Q5W041 872 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 SYT10Q6XYQ8 523 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF438Q7Z4V0 828 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 SFRP1Q8N474 314 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ARL14Q8N4G2 192 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 MCUQ8NE86 351 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 WDR48Q8TAF3 677 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 PATE1Q8WXA2 126 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF778Q96MU6 729 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 COPS8Q99627 209 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ABCG4Q9H172 646 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 FAM96AQ9H5X1 160 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 ZDHHC3Q9NYG2 299 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 SLC2A6Q9UGQ3 507 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 RABGEF1Q9UJ41 708 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 DNMT3AQ9Y6K1 912 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 RNF215Q9Y6U7 377 aa17.96■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC162PA2VCL2 907 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 MT-CO3P00414 261 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 RALBP11234 206 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 MLNP12872 115 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 ACRV1P26436 265 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 FOXN2P32314 431 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 CDKN1CP49918 316 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 TERF1P54274 439 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 CLDN6P56747 220 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 PTK6Q13882 451 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 PLA2G4EQ3MJ16 856 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 BCL7AQ4VC05 210 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 IYDQ6PHW0 289 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 TMEM220Q6QAJ8 160 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 AFTPHQ6ULP2 937 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 SYDE1Q6ZW31 735 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 MICALCLQ6ZW33 695 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 CAND1Q86VP6 1230 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 SERPINA9Q86WD7 417 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 PIANPQ8IYJ0 282 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 DCBLD1Q8N8Z6 715 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 HDAC10Q969S8 669 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 DCUN1D1Q96GG9 259 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 SGSM3Q96HU1 749 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 KIFC1Q9BW19 673 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 MRM3Q9HC36 420 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 CHRAC1Q9NRG0 131 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 LRIT1Q9P2V4 623 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 BPTFQ12830 3046 aa17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 ZNF106Q9H2Y7 1883 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-209ENST00000503346 OR2AG2A6NM03 316 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 OR5K4A6NMS3 321 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 CFAP99D6REC4 459 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 SGTAO43765 313 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 POP7O75817 140 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 PRSS56P0CW18 603 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 F3P13726 295 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 SLC2A4P14672 509 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 JUPP14923 745 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 VCLP18206 1134 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 MGAT1P26572 445 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 FASLGP48023 281 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 CRADDP78560 199 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 DMPKQ09013 629 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 NR1D2Q14995 579 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 WASH2PQ6VEQ5 465 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 AMZ2Q86W34 360 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 KLHL7Q8IXQ5 586 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 NAT8LQ8N9F0 302 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 SGF29Q96ES7 293 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 CCDC97Q96F63 343 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 LINC00615Q96LM1 132 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 OSGEPL1Q9H4B0 414 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 XAB2Q9HCS7 855 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 WASH6PQ9NQA3 447 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 TREX1Q9NSU2 369 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 SYBUQ9NX95 663 aa17.94■□□□□ 0.46
PDLIM7-209ENST00000503346 ASIC3Q9UHC3 531 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms