RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PXKQ7Z7A4 578 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 SMRP1Q8NCR6 262 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 OR14L1PQ8NHC6 308 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 ARHGEF2Q92974 986 aaKnown RBP5.73□□□□□ -1.49
NIPBL-203ENST00000503274 IGSF8Q969P0 613 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 IGSF21Q96ID5 467 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 WDFY2Q96P53 400 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 ACOX2Q99424 681 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 PCGF1Q9BSM1 259 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 SLC28A3Q9HAS3 691 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 PCDH9Q9HC56 1237 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 MCM9Q9NXL9 1143 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 C1RLQ9NZP8 487 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 ADAM18Q9Y3Q7 739 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 LRP12Q9Y561 859 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 MAU2Q9Y6X3 613 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 BTAF1O14981 1849 aa5.73□□□□□ -1.49
NIPBL-203ENST00000503274 NSD2O96028 1365 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 MAP3K5Q99683 1374 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 DENND3A2RUS2 1198 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 EME2A4GXA9 379 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 MID1O15344 667 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SH3BP5O60239 455 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 WDHD1O75717 1129 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SLC25A12O75746 678 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 RNASEH2AO75792 299 aaKnown RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 HSP90AB1P08238 724 aaKnown RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 LINC00271P0C7V0 271 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 BRWD1-AS2P59051 145 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 EEF1A2Q05639 463 aaKnown RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 NIPAL4Q0D2K0 466 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 GRIK2Q13002 908 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 MED22Q15528 200 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 TTI2Q6NXR4 508 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 NCEH1Q6PIU2 408 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 DPPA4Q7L190 304 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 CACNA2D4Q7Z3S7 1137 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 ARHGAP12Q8IWW6 846 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 PDILTQ8N807 584 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SGCDQ92629 289 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SKA1Q96BD8 255 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 ARHGEF26Q96DR7 871 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 RRNAD1Q96FB5 475 aaKnown RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SPRY4Q9C004 299 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 RANGRFQ9HD47 186 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-203ENST00000503274 KRT84Q9NSB2 600 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 TMOD3Q9NYL9 352 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 MEGF6O75095 1541 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 CASZ1Q86V15 1759 aa5.72□□□□□ -1.49
NIPBL-203ENST00000503274 SAA2-SAA4A0A096LPE2 208 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 SMTNL1A8MU46 457 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 SLC16A5O15375 505 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 USO1O60763 962 aaKnown RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 LAMP2P13473 410 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 ARL3P36405 182 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 TNNT2P45379 298 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 CSNK2A1P68400 391 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 SETQ01105 290 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 CDONQ4KMG0 1287 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 CCDC30Q5VVM6 783 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 RGMBQ6NW40 437 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 DUS1LQ6P1R4 473 aaKnown RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 TBC1D1Q86TI0 1168 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 DCP1BQ8IZD4 617 aaKnown RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 NGEFQ8N5V2 710 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 CSNK2A3Q8NEV1 391 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 MUC13Q9H3R2 512 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 LTB4R2Q9NPC1 389 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 ACSS1Q9NUB1 689 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-203ENST00000503274 POLKQ9UBT6 870 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 KNSTRNQ9Y448 316 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 KIF20BQ96Q89 1820 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 ITIH6Q6UXX5 1313 aa5.71□□□□□ -1.5
NIPBL-203ENST00000503274 PALLDQ8WX93 1383 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 LIPT2A6NK58 231 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 CLGNO14967 610 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 HNRNPCL1O60812 293 aaKnown RBP5.7□□□□□ -1.5
NIPBL-203ENST00000503274 JRKO75564 520 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 BAIAP3O94812 1187 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 EGFP01133 1207 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 SNRNP70P08621 437 aaKnown RBP5.7□□□□□ -1.5
NIPBL-203ENST00000503274 HSPA5P11021 654 aaKnown RBP5.7□□□□□ -1.5
NIPBL-203ENST00000503274 CDH2P19022 906 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-203ENST00000503274 GAS1P54826 345 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 DCAF7P61962 342 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 FOXM1Q08050 763 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 MAMLD1Q13495 774 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 SNX30Q5VWJ9 437 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 C1orf122Q6ZSJ8 110 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 OR2AK2Q8NG84 335 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 SPATA22Q8NHS9 363 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 PIGBQ92521 554 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 ORAI1Q96D31 301 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 TMEM19Q96HH6 336 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 PANK3Q9H999 370 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 PROCRQ9UNN8 238 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 VDAC3Q9Y277 283 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 LOXL2Q9Y4K0 774 aa5.7□□□□□ -1.5
NIPBL-203ENST00000503274 PLEKHG2Q9H7P9 1386 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms