RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 CYP4Z2PQ8N1L4 340 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 BPIFB6Q8NFQ5 453 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 SUSD6Q92537 303 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 ZBTB42B2RXF5 422 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 KRT75O95678 551 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 DLGAP3O95886 979 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 CAPN1P07384 714 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 NCF4Q15080 339 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 RAET1GQ6H3X3 334 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 ZCCHC8Q6NZY4 707 aaKnown RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 CYP20A1Q6UW02 462 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 RAVER1Q8IY67 606 aaKnown RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 FAM156AQ8NDB6 213 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 HMG20AQ9NP66 347 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 KLHL28Q9NXS3 571 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 ELOVL7A1L3X0 281 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 SH3BGRLO75368 114 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 HSMCR30P0CW71 290 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 ETS2P15036 469 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 FOXM1Q08050 763 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 LPIN1Q14693 890 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 GPRIN1Q7Z2K8 1008 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 GLB1L3Q8NCI6 653 aaPredicted RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 CD99L2Q8TCZ2 262 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 PGAP3Q96FM1 320 aaPredicted RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 REXO5Q96IC2 774 aaKnown RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 RANBP9Q96S59 729 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 RBM4BQ9BQ04 359 aaKnown RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 RBM4Q9BWF3 364 aaKnown RBP10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 PLGRKTQ9HBL7 147 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
LIMCH1-205ENST00000503057 NEDD8-MDP1E9PL57 170 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 GUCY1B2O75343 617 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 IL6P05231 212 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 RPS9P46781 194 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 RPIAP49247 311 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TMED10P49755 219 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 PAQR3Q6TCH7 311 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 MTSS1LQ765P7 747 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SNX20Q7Z614 316 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TMEM126BQ8IUX1 230 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CBR4Q8N4T8 237 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 DNAJB8Q8NHS0 232 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CSGALNACT1Q8TDX6 532 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SLC7A6OSQ96CW6 309 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 AARSD1Q9BTE6 412 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 NLNQ9BYT8 704 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 AKTIPQ9H8T0 292 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 PRAMEF11O60813 436 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SCELO95171 688 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 GLUD1P00367 558 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ATP4BP51164 291 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 DOK6Q6PKX4 331 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 RALGPS2Q86X27 583 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 PGBD3Q8N328 593 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 GORASP1Q9BQQ3 440 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 DERL2Q9GZP9 239 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CCSER2Q9H7U1 834 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TIMMDC1Q9NPL8 285 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TBC1D14Q9P2M4 693 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 DAPK2Q9UIK4 370 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CNOT6Q9ULM6 557 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 THSD7AQ9UPZ6 1657 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 UGT2B11O75310 529 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ECI2O75521 394 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 LRATO95237 230 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 C8GP07360 202 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ELFN1P0C7U0 828 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 XRCC1P18887 633 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CCNA2P20248 432 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SERINC3Q13530 473 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CCDC85BQ15834 202 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ADGRF1Q5T601 910 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CWF19L1Q69YN2 538 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ANO7Q6IWH7 933 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 DBF4BQ8NFT6 615 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TADA1Q96BN2 335 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 COQ10BQ9H8M1 238 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CCNB1IP1Q9NPC3 277 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 KLHL3Q9UH77 587 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 MYH9P35579 1960 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 C1QTNF3-AMACRE9PGA6 284 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 KDELR3O43731 214 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 CXCL14O95715 111 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ZNF865P0CJ78 1059 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ACVRL1P37023 503 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TAZQ16635 292 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 SPATS1Q496A3 300 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 FBXO48Q5FWF7 155 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TNFAIP8L3Q5GJ75 292 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 FGD3Q5JSP0 725 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 PAGE2Q7Z2X7 111 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 PDSS2Q86YH6 399 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 ZCCHC7Q8N3Z6 543 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-205ENST00000503057 RETREG1Q9H6L5 497 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms