RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TMEM126BQ8IUX1 230 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 RHOT1Q8IXI2 618 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 KLHL6Q8WZ60 621 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 HSPH1Q92598 858 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 CXorf40BQ96DE9 158 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 ZDHHC12Q96GR4 267 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 RANBP9Q96S59 729 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 SPATA16Q9BXB7 569 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 GPR87Q9BY21 358 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 ZWILCHQ9H900 591 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 MLXIPLQ9NP71 852 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 TAS2R14Q9NYV8 317 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 DTLQ9NZJ0 730 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 G3BP2Q9UN86 482 aaKnown RBP8.97□□□□□ -0.97
CCDC171-209ENST00000498725 PPIL1Q9Y3C6 166 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 PCSK5Q92824 1860 aa8.97□□□□□ -0.97
CCDC171-209ENST00000498725 PIKFYVEQ9Y2I7 2098 aa8.96□□□□□ -0.97
CCDC171-209ENST00000498725 ANKRD17O75179 2603 aaKnown RBP8.96□□□□□ -0.97
CCDC171-209ENST00000498725 GOLGA6L3A6NEY3 463 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 ANKUB1A6NFN9 424 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 H3BRJ5 948 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 TOX3O15405 576 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 NUAK1O60285 661 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 MTX2O75431 263 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 SCRG1O75711 98 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 TMEM63AO94886 807 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 SLC25A14O95258 325 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 CBX6O95503 412 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 RECKO95980 971 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 IL4RP24394 825 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 GRNP28799 593 aaKnown RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 ARL4AP40617 200 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 CAPZBP47756 277 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 SPINT3P49223 89 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 IHHQ14623 411 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 GPR19Q15760 415 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 PLEKHN1Q494U1 663 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 FAM182AQ5T1J6 154 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 ACAD10Q6JQN1 1059 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 LCN10Q6JVE6 187 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 CYP4V2Q6ZWL3 525 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 PRSS42Q7Z5A4 293 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 IQCKQ8N0W5 287 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 ENDOVQ8N8Q3 282 aaKnown RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 AVL9Q8NBF6 648 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 LRRN4Q8WUT4 740 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 PNPLA2Q96AD5 504 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 MOCOSQ96EN8 888 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 UNKQ9C0B0 810 aaKnown RBP8.96□□□□□ -0.98
CCDC171-209ENST00000498725 CARD9Q9H257 536 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 CHST8Q9H2A9 424 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 FAM83DQ9H4H8 585 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 RMI1Q9H9A7 625 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 FGF21Q9NSA1 209 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 IGSF5Q9NSI5 407 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 GPR83Q9NYM4 423 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 PKD2L2Q9NZM6 624 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
CCDC171-209ENST00000498725 RP1L1Q8IWN7 2480 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 EIF3CLB5ME19 914 aaKnown RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 FZD6O60353 706 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 PIRTP0C851 137 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 TCF4P15884 667 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF7P17097 686 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 GLRBP48167 497 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 CDH6P55285 790 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ITGA1P56199 1179 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 GPS2Q13227 327 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 MAMLD1Q13495 774 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ZRANB3Q5FWF4 1079 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF569Q5MCW4 686 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 FKBP15Q5T1M5 1219 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 HENMT1Q5T8I9 393 aaKnown RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 PRAMEF17Q5VTA0 474 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 PAPD7Q5XG87 772 aaKnown RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 CYB5D1Q6P9G0 228 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 FBXO38Q6PIJ6 1188 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 NLRP8Q86W28 1048 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 AOPEPQ8N6M6 819 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF514Q96K75 400 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 EIF3CQ99613 913 aaKnown RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 MAP3K3Q99759 626 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 ILKAPQ9H0C8 392 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 UCK1Q9HA47 277 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 SLC40A1Q9NP59 571 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 WASH6PQ9NQA3 447 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 PARVAQ9NVD7 372 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 MYO1AQ9UBC5 1043 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 PSMD13Q9UNM6 376 aa8.95□□□□□ -0.98
CCDC171-209ENST00000498725 MDC1Q14676 2089 aaKnown RBP8.95□□□□□ -0.98
CCDC171-209ENST00000498725 FBN2P35556 2912 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 UBA6A0AVT1 1052 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 KMOO15229 486 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 LRRTM2O43300 516 aa8.94□□□□□ -0.98
CCDC171-209ENST00000498725 HNRNPRO43390 633 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 CPNE3O75131 537 aaKnown RBP8.94□□□□□ -0.98
CCDC171-209ENST00000498725 CEACAM4O75871 244 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms