RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TIMM29Q9BSF4 260 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 STN1Q9H668 368 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SMOXQ9NWM0 555 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SLC23A2Q9UGH3 650 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SNX12Q9UMY4 172 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 DNMT3AQ9Y6K1 912 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 HEATR9A2RTY3 570 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 OR2AG2A6NM03 316 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 TMX2-CTNND1H3BSU7 103 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 H7C0S8 307 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
HSPG2-213ENST00000498495 CCL22O00626 93 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 EML2O95834 649 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 RALBP11234 206 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ADRA1DP25100 572 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 GPR3P46089 330 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 PPM1FP49593 454 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-213ENST00000498495 OR1D5P58170 312 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 GNG11P61952 73 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 CCDC173Q0VFZ6 552 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 RTP5Q14D33 572 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-213ENST00000498495 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 GPR33Q49SQ1 333 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 TAS2R42Q7RTR8 314 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 SPRED1Q7Z699 444 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 AMZ2Q86W34 360 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 SFRP1Q8N474 314 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 SH3KBP1Q96B97 665 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 SGF29Q96ES7 293 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF514Q96K75 400 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-213ENST00000498495 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ZMIZ1Q9ULJ6 1067 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ATXN7L1Q9ULK2 861 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-213ENST00000498495 PYCARDQ9ULZ3 195 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ENTPD2Q9Y5L3 495 aa12.61□□□□□ -0.39
HSPG2-213ENST00000498495 ASXL3Q9C0F0 2248 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KIR2DS5A0A0G2JLQ3 304 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 A0A0G2JNG1 304 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CCDC78A2IDD5 438 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 MROH6A6NGR9 719 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 AGAP14A8MT82 685 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KIR2DS3K7RE56 304 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 AP3B1O00203 1094 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CES2O00748 559 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF185O15231 689 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KRT14P02533 472 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CAPNS1P04632 268 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 TCP1P17987 556 aaKnown RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 FASLGP48023 281 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CTSCP53634 463 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 INHBCP55103 352 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 HHEXQ03014 270 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KIR2DS5Q14953 304 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 NR1D2Q14995 579 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CCDC38Q502W7 563 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 FNBP1LQ5T0N5 605 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 CCDC137Q6PK04 289 aaKnown RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 USP53Q70EK8 1073 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 DET1Q7L5Y6 550 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 NLRP9Q7RTR0 991 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF438Q7Z4V0 828 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 C11orf96Q7Z7L8 435 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 PIM3Q86V86 326 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 LSMEM2Q8N112 164 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 NXPE1Q8N323 547 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 AVL9Q8NBF6 648 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 AHCYL2Q96HN2 611 aaKnown RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 TMEM74Q96NL1 305 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 COPS8Q99627 209 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 STRADBQ9C0K7 418 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 SARS2Q9NP81 518 aaKnown RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 EIF2B3Q9NR50 452 aaKnown RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 DKK4Q9UBT3 224 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 MYLKQ15746 1914 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 ARHGEF17Q96PE2 2063 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-213ENST00000498495 KNTC1P50748 2209 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 SCN8AQ9UQD0 1980 aa12.6□□□□□ -0.39
HSPG2-213ENST00000498495 RP1P56715 2156 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 GOLGA6L10A0A0M3HER8 536 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 A6NCN8 305 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 D6RAR5 112 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CPNE6O95741 557 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 VIPP01282 170 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 MPOP05164 745 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 ATP1B2P14415 290 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 XRCC1P18887 633 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms