RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PDZD3Q86UT5 571 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 TRAPPC5Q8IUR0 188 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 LRRC8AQ8IWT6 810 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 SPACA3Q8IXA5 215 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 KLHDC8BQ8IXV7 354 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 OR4K2Q8NGD2 314 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 SLC38A3Q99624 504 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 TIMM29Q9BSF4 260 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 STN1Q9H668 368 aaKnown RBP18.14■□□□□ 0.49
HOXD11-202ENST00000498438 UGT1A7Q9HAW7 530 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 UGT1A10Q9HAW8 530 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 UGT1A8Q9HAW9 530 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 SARS2Q9NP81 518 aaKnown RBP18.14■□□□□ 0.49
HOXD11-202ENST00000498438 LZTFL1Q9NQ48 299 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 DNAJC16Q9Y2G8 782 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 KCTD3Q9Y597 815 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 AHCTF1Q8WYP5 2266 aa18.14■□□□□ 0.49
HOXD11-202ENST00000498438 C2orf81A6NN90 581 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 PRAMEF1O95521 474 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 METTL18O95568 372 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CCDC175P0C221 793 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CSF2RBP32927 897 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CCZ1BP86790 482 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CCZ1P86791 482 aaPredicted RBP18.13■□□□□ 0.49
HOXD11-202ENST00000498438 TLE3Q04726 772 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 MSLNQ13421 630 aaPredicted RBP18.13■□□□□ 0.49
HOXD11-202ENST00000498438 NFATC2Q13469 925 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 PARP6Q2NL67 630 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 LDLRAP1Q5SW96 308 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 DENND5AQ6IQ26 1287 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 ZNF574Q6ZN55 896 aaPredicted RBP18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CLEC14AQ86T13 490 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 SLC9B2Q86UD5 537 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 DDHD1Q8NEL9 900 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 BRSK1Q8TDC3 778 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 KCNE4Q8WWG9 221 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 LRRC45Q96CN5 670 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 TTC25Q96NG3 672 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 ALS2CR12Q96Q35 445 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 ZCCHC2Q9C0B9 1178 aaKnown RBP18.13■□□□□ 0.49
HOXD11-202ENST00000498438 ZMYND15Q9H091 742 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 SMOXQ9NWM0 555 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 PISDQ9UG56 409 aa18.13■□□□□ 0.49
HOXD11-202ENST00000498438 CACNA1GO43497 2377 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 KIR2DS5A0A0G2JLQ3 304 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 A0A0G2JNG1 304 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 IGHV5-10-1A0A0J9YXX1 117 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 PRR19A6NJB7 356 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 KIR2DS3K7RE56 304 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 JMJD7P0C870 316 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 HOXB3P14651 431 aaPredicted RBP18.12■□□□□ 0.49
HOXD11-202ENST00000498438 ITIH1P19827 911 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 GPLD1P80108 840 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 CFHR1Q03591 330 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 KIR2DS5Q14953 304 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 C16orf72Q14CZ0 275 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 RPS6KA1Q15418 735 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 SEPT7Q16181 437 aaKnown RBP18.12■□□□□ 0.49
HOXD11-202ENST00000498438 P3H1Q32P28 736 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 GPRC6AQ5T6X5 926 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 MEI1Q5TIA1 1274 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 KCTD11Q693B1 232 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 C11orf96Q7Z7L8 435 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 TAB3Q8N5C8 712 aaPredicted RBP18.12■□□□□ 0.49
HOXD11-202ENST00000498438 OR13C4Q8NGS5 318 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 UBE2Q2Q8WVN8 375 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 TMEM159Q96B96 161 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 CCDC74BQ96LY2 380 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 ARNT2Q9HBZ2 717 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 SCHIP1Q9P0W5 487 aaPredicted RBP18.12■□□□□ 0.49
HOXD11-202ENST00000498438 FKBPLQ9UIM3 349 aa18.12■□□□□ 0.49
HOXD11-202ENST00000498438 OR5K4A6NMS3 321 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 PDZK1P1A8MUH7 402 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 LIASO43766 372 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 DUX1O43812 170 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 CRTAMO95727 393 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 PPM1FP49593 454 aaPredicted RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 ZNF140P52738 457 aaPredicted RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 CTSCP53634 463 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 UBE2IP63279 158 aaKnown RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 PDE1BQ01064 536 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 SQSTM1Q13501 440 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 ZNF662Q6ZS27 426 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 SLC13A5Q86YT5 568 aaPredicted RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 JAMLQ86YT9 394 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 RCBTB1Q8NDN9 531 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 OR4D9Q8NGE8 314 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 OR10G6Q8NH81 332 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 ZNF398Q8TD17 642 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 SH3KBP1Q96B97 665 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 RTP4Q96DX8 246 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 AHCYL2Q96HN2 611 aaKnown RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 CMKLR1Q99788 373 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 LRRC40Q9H9A6 602 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 TMEM9Q9P0T7 183 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 CPNE7Q9UBL6 633 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
HOXD11-202ENST00000498438 PCDHGA7Q9Y5G6 932 aa18.11■□□□□ 0.49
HOXD11-202ENST00000498438 IGSF10Q6WRI0 2623 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms