RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ENPP6Q6UWR7 440 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 DTX3Q8N9I9 347 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 HCAR2Q8TDS4 363 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CEP19Q96LK0 163 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 MYOCQ99972 504 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SEMA4BQ9NPR2 832 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CCDC177Q9NQR7 707 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 ERVK13-1Q9NX77 482 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 PCDHA9Q9Y5H5 950 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SNX10Q9Y5X0 201 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 M0QYT0 321 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 SCO2O43819 266 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 ERCC2P18074 760 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 LBPP18428 481 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 GPLD1P80108 840 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 CDC20Q12834 499 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 CDH17Q12864 832 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 PFKFB4Q16877 469 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 MPZL3Q6UWV2 235 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 TTC39CQ8N584 583 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 PTGR2Q8N8N7 351 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 GPRASP2Q96D09 838 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 MRPL45Q9BRJ2 306 aaKnown RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 FAM49AQ9H0Q0 323 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 KAT8Q9H7Z6 458 aaKnown RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 AMBNQ9NP70 447 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 NECTIN3Q9NQS3 549 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 FBXO5Q9UKT4 447 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 BTBD3Q9Y2F9 522 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 EVPLLA8MZ36 301 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 DPYSL4O14531 572 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 UBL4AP11441 157 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 ACADSBP45954 432 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 SH3BP2P78314 561 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 CDK10Q15131 360 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 TAB1Q15750 504 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 TECRLQ5HYJ1 363 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 ZNF544Q6NX49 715 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 PIM3Q86V86 326 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 UBE2J2Q8N2K1 259 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 PHF10Q8WUB8 498 aaKnown RBP12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 ANKRD49Q8WVL7 239 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 MBOAT4Q96T53 435 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 FICDQ9BVA6 458 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
GAPVD1-220ENST00000497580 NUP205Q92621 2012 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 CD83Q01151 205 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 CHRNEQ04844 493 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 CLYBLQ8N0X4 340 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 DTWD1Q8N5C7 304 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 GSTO2Q9H4Y5 243 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 SCN3BQ9NY72 215 aa12.96□□□□□ -0.34
GAPVD1-220ENST00000497580 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM72CH0Y354 149 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 ERVH48-1M5A8F1 160 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 AIREO43918 545 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 SCO1O75880 301 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 LTA4HP09960 611 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 PCMT1P22061 227 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 KCNC1P48547 511 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 GLUD2P49448 558 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 RABGGTBP53611 331 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 TPI1P60174 286 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 GTF2H3Q13889 308 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 SELPLGQ14242 412 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM72AQ5TYM5 149 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM72DQ6L9T8 149 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM72BQ86X60 149 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC43A3Q8NBI5 491 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 UBASH3BQ8TF42 649 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 LPAR1Q92633 364 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 VPS35Q96QK1 796 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CDT1Q9H211 546 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 OPTCQ9UBM4 332 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 ISPDA4D126 451 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms