RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 COMTP21964 271 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 PTPN3P26045 913 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 CDKN2BP42772 138 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 ARSDP51689 593 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 HADHBP55084 474 aaKnown RBP12.21□□□□□ -0.45
VPS72-206ENST00000496809 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
VPS72-206ENST00000496809 MC1RQ01726 317 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 KCNC4Q03721 635 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 AGAP9Q5VTM2 703 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 CRTC3Q6UUV7 619 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 ABRAXAS1Q6UWZ7 409 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 MFSD7Q6UXD7 560 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 TMEM26Q6ZUK4 368 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 SPATA22Q8NHS9 363 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 GDAP1Q8TB36 358 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
VPS72-206ENST00000496809 GPN2Q9H9Y4 310 aaPredicted RBP12.21□□□□□ -0.45
VPS72-206ENST00000496809 PCYT1BQ9Y5K3 369 aaPredicted RBP12.21□□□□□ -0.45
VPS72-206ENST00000496809 ATMQ13315 3056 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 MN1Q10571 1320 aaPredicted RBP12.2□□□□□ -0.46
VPS72-206ENST00000496809 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 CST8O60676 142 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 LIFP15018 202 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 HALP42357 657 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 MAGEA1P43355 309 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 CCR10P46092 362 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 ABHD18Q0P651 414 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 KLHL35Q6PF15 583 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 SPOCD1Q6ZMY3 1216 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 ATG14Q6ZNE5 492 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 PID1Q7Z2X4 250 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 RCOR2Q8IZ40 523 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 PMEPA1Q969W9 287 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 ZDHHC12Q96GR4 267 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
VPS72-206ENST00000496809 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 TBC1D10AQ9BXI6 508 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 ARFGAP3Q9NP61 516 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 KLHL8Q9P2G9 620 aaPredicted RBP12.2□□□□□ -0.46
VPS72-206ENST00000496809 KLHL3Q9UH77 587 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 TRHDEQ9UKU6 1024 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 PKP3Q9Y446 797 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 TMEM184BQ9Y519 407 aaPredicted RBP12.2□□□□□ -0.46
VPS72-206ENST00000496809 ALG6Q9Y672 507 aa12.2□□□□□ -0.46
VPS72-206ENST00000496809 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 STK17BO94768 372 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 C9P02748 559 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 HLA-DPA1P20036 260 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 SLC19A1P41440 591 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 WNT3AP56704 352 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 CYP4F2P78329 520 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 TMEM115Q12893 351 aaPredicted RBP12.19□□□□□ -0.46
VPS72-206ENST00000496809 MPP3Q13368 585 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 MAP7Q14244 749 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 IL11RAQ14626 422 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 SPA17Q15506 151 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 TAZQ16635 292 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 LDLRAP1Q5SW96 308 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 ZNF648Q5T619 568 aaPredicted RBP12.19□□□□□ -0.46
VPS72-206ENST00000496809 KAZNQ674X7 775 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 TRAPPC5Q8IUR0 188 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 CCDC50Q8IVM0 306 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 KATNAL2Q8IYT4 538 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 ESX1Q8N693 406 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 HTR3CQ8WXA8 447 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 ZNF514Q96K75 400 aaPredicted RBP12.19□□□□□ -0.46
VPS72-206ENST00000496809 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
VPS72-206ENST00000496809 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 FCRL5Q96RD9 977 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 CTRCQ99895 268 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 FSD1LQ9BXM9 530 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 SPRY4Q9C004 299 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 BPIFA1Q9NP55 256 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 UBP1Q9NZI7 540 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 SLC23A2Q9UGH3 650 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 DNAJC16Q9Y2G8 782 aa12.19□□□□□ -0.46
VPS72-206ENST00000496809 DNMT3AQ9Y6K1 912 aaPredicted RBP12.19□□□□□ -0.46
VPS72-206ENST00000496809 MTX2O75431 263 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 RASSF9O75901 435 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 WISP1O95388 367 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 ZIC2O95409 532 aaPredicted RBP12.18□□□□□ -0.46
VPS72-206ENST00000496809 TYRP1P17643 537 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 ITGB6P18564 788 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 WT1P19544 449 aaPredicted RBP12.18□□□□□ -0.46
VPS72-206ENST00000496809 NFKB1P19838 968 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 RPL10P27635 214 aaKnown RBP12.18□□□□□ -0.46
VPS72-206ENST00000496809 SPAM1P38567 509 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 CSRP3P50461 194 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 FOXM1Q08050 763 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 WASHC5Q12768 1159 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 XRCC4Q13426 336 aa12.18□□□□□ -0.46
VPS72-206ENST00000496809 SEPT7Q16181 437 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms