RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 E7ENX8 843 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 H3BNX3 289 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 HTRA2O43464 458 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CCNT2O60583 730 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SMIM24O75264 130 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 RFC2P35250 354 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PPP3CCP48454 512 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CCNHP51946 323 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 RAD51Q06609 339 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 NFATC2Q13469 925 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 TGFBIQ15582 683 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ZXDCQ2QGD7 858 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CHSY3Q70JA7 882 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 NECAB2Q7Z6G3 386 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 OR2AP1Q8NGE2 309 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PEX13Q92968 403 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 NAF1Q96HR8 494 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 MYCBPQ99417 103 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 WDR41Q9HAD4 459 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 VTI1BQ9UEU0 232 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 TRMT6Q9UJA5 497 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 MAP3K13O43283 966 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 OR4F21O95013 312 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SLC25A14O95258 325 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ADH1AP07327 375 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 TYRP14679 529 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 VIPR2P41587 438 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 MRPS22P82650 360 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 FASTKQ14296 549 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ZNF423Q2M1K9 1284 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 VPS26BQ4G0F5 336 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ATP13A5Q4VNC0 1218 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 HABP4Q5JVS0 413 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 RETSATQ6NUM9 610 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SBSNQ6UWP8 590 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ADIPOR2Q86V24 386 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CDYL2Q8N8U2 506 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 KYQ8NBH2 561 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 STAG3L4Q8TBR4 150 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 ASIC4Q96FT7 647 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 KLHL32Q96NJ5 620 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 TFB2MQ9H5Q4 396 aaKnown RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 MAGEE1Q9HCI5 957 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SLAMF8Q9P0V8 285 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 POLG2Q9UHN1 485 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PCTPQ9UKL6 214 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 LRRC42Q9Y546 428 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PCDHGA7Q9Y5G6 932 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SLC30A1Q9Y6M5 507 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PLK4O00444 970 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 E2F3O00716 465 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CIB2O75838 187 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 THRAP10827 490 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CEBPBP17676 345 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PSMA3P25788 255 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PEX2P28328 305 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 PPM1AP35813 382 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 MPPE1Q53F39 396 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 LETMD1Q6P1Q0 360 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 FBXO46Q6PJ61 603 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 LMNTD2Q8IXW0 634 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 BEND7Q8N7W2 519 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 S100A14Q9HCY8 104 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 CD274Q9NZQ7 290 aa10.28□□□□□ -0.76
SAMM50-206ENST00000494795 KIAA1522Q9P206 1035 aaPredicted RBP10.28□□□□□ -0.76
SAMM50-206ENST00000494795 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.76
SAMM50-206ENST00000494795 PSMD12O00232 456 aaPredicted RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 AZIN1O14977 448 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 NVLO15381 856 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 VPS26AO75436 327 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 CTSLP07711 333 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 TTPAP49638 278 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 CCNG1P51959 295 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 KPNA2P52292 529 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 HK2P52789 917 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 ERVPABLB-1P60509 514 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 NFKB2Q00653 900 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 CAPRIN1Q14444 709 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 TRMT5Q32P41 509 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 PIGGQ5H8A4 983 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 C22orf39Q6P5X5 142 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 VRK3Q8IV63 474 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 RP9Q8TA86 221 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 VPS33AQ96AX1 596 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 ARMC5Q96C12 935 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 CCDC28BQ9BUN5 200 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 FARSBQ9NSD9 589 aaKnown RBP10.27□□□□□ -0.77
SAMM50-206ENST00000494795 ZMYM5Q9UJ78 669 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 RIMKLBQ9ULI2 386 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 ITM2BQ9Y287 266 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 H7C0S8 307 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 CAPN3P20807 821 aa10.27□□□□□ -0.77
SAMM50-206ENST00000494795 BMPR1AP36894 532 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms