RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PLA2G4EQ3MJ16 856 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 CRTC2Q53ET0 693 aaPredicted RBP22.88■■□□□ 1.25
COL27A1-208ENST00000494780 TEX44Q53QW1 395 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 FAM182AQ5T1J6 154 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 LRRC38Q5VT99 294 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 ABRAXAS1Q6UWZ7 409 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 NPNTQ6UXI9 565 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 RFX6Q8HWS3 928 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 GLOD4Q9HC38 313 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 POT1Q9NUX5 634 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 ZNHIT6Q9NWK9 470 aaKnown RBP22.88■■□□□ 1.25
COL27A1-208ENST00000494780 UBR5O95071 2799 aaPredicted RBP22.88■■□□□ 1.25
COL27A1-208ENST00000494780 HECTD1Q9ULT8 2610 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 PDZK1P1A8MUH7 402 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 CDK14O94921 469 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 MT-CYBP00156 380 aaPredicted RBP22.87■■□□□ 1.25
COL27A1-208ENST00000494780 KRT1P04264 644 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 PRKAR1AP10644 381 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 TYRP1P17643 537 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 AMD1P17707 334 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 STAT5AP42229 794 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 TLE1Q04724 770 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 FOXM1Q08050 763 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 WASH2PQ6VEQ5 465 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 PTRH1Q86Y79 214 aaKnown RBP22.87■■□□□ 1.25
COL27A1-208ENST00000494780 RHOT2Q8IXI1 618 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 SPATA22Q8NHS9 363 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 STARD8Q92502 1023 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 VPS35Q96QK1 796 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 WASH6PQ9NQA3 447 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 DNAJC16Q9Y2G8 782 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 SLC30A1Q9Y6M5 507 aa22.87■■□□□ 1.25
COL27A1-208ENST00000494780 BSNQ9UPA5 3926 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 A0A0A6YYK5 440 aaPredicted RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 MTX2O75431 263 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 IDSP22304 550 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 SEPT7Q16181 437 aaKnown RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 ODF2Q5BJF6 829 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 AGAP9Q5VTM2 703 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 ZNF547Q8IVP9 402 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 RBM12BQ8IXT5 1001 aaKnown RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 C9orf43Q8TAL5 461 aaPredicted RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 APOBEC4Q8WW27 367 aaKnown RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 RNF25Q96BH1 459 aaPredicted RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 TGM7Q96PF1 710 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 ZNF768Q9H5H4 540 aaKnown RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 DDX56Q9NY93 547 aaKnown RBP22.86■■□□□ 1.25
COL27A1-208ENST00000494780 SPO11Q9Y5K1 396 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 RPS6KL1Q9Y6S9 549 aa22.86■■□□□ 1.25
COL27A1-208ENST00000494780 BRAFP15056 766 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 VCLP18206 1134 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 TCN2P20062 427 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 OAS2P29728 719 aaKnown RBP22.85■■□□□ 1.25
COL27A1-208ENST00000494780 SLC1A1P43005 524 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 DYNLT1P63172 113 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 KHDC1Q4VXA5 237 aaKnown RBP22.85■■□□□ 1.25
COL27A1-208ENST00000494780 BZW1Q7L1Q6 419 aaKnown RBP22.85■■□□□ 1.25
COL27A1-208ENST00000494780 RHOT1Q8IXI2 618 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 TEKT5Q96M29 485 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 ULBP3Q9BZM4 244 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 SLC40A1Q9NP59 571 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 TMPRSS11EQ9UL52 423 aa22.85■■□□□ 1.25
COL27A1-208ENST00000494780 AURKAO14965 403 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 PMPCBO75439 489 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 PTPN3P26045 913 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 RPL10P27635 214 aaKnown RBP22.84■■□□□ 1.25
COL27A1-208ENST00000494780 HMGCLP35914 325 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 LEPRP48357 1165 aaKnown RBP22.84■■□□□ 1.25
COL27A1-208ENST00000494780 NR2C2P49116 596 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 GTF2H3Q13889 308 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 IL11RAQ14626 422 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 PRKD1Q15139 912 aaPredicted RBP22.84■■□□□ 1.25
COL27A1-208ENST00000494780 DEFB109BQ30KR1 87 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 B4GALNT4Q76KP1 1039 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 PRSS42Q7Z5A4 293 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 C11orf96Q7Z7L8 435 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 DTX3LQ8TDB6 740 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 ANP32EQ9BTT0 268 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 TRABDQ9H4I3 376 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 ANAPC2Q9UJX6 822 aa22.84■■□□□ 1.25
COL27A1-208ENST00000494780 CBFA2T2O43439 604 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 KCNJ13O60928 360 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 RASSF9O75901 435 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 CAPZBP47756 277 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 SEPHS1P49903 392 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 TMEM115Q12893 351 aaPredicted RBP22.83■■□□□ 1.25
COL27A1-208ENST00000494780 ATP13A5Q4VNC0 1218 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 C16orf46Q6P387 395 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 C6orf15Q6UXA7 325 aaPredicted RBP22.83■■□□□ 1.25
COL27A1-208ENST00000494780 MFSD7Q6UXD7 560 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 BRSK1Q8TDC3 778 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 RSC1A1Q92681 617 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 CXorf40BQ96DE9 158 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 ZDHHC12Q96GR4 267 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 CCDC42Q96M95 316 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 OR6C1Q96RD1 312 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 CHP1Q99653 195 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 BPIFA1Q9NP55 256 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 SPTLC3Q9NUV7 552 aa22.83■■□□□ 1.25
COL27A1-208ENST00000494780 UBP1Q9NZI7 540 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms