RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TIGD2Q4W5G0 525 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 FBXO48Q5FWF7 155 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 LINC00299Q6ZSB3 139 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
SDF4-207ENST00000494748 MINDY2Q8NBR6 621 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 FBLIM1Q8WUP2 373 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 NUDT8Q8WV74 236 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 HMG20AQ9NP66 347 aa15.23■□□□□ 0.03
SDF4-207ENST00000494748 CCDC154A6NI56 674 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 MSI1O43347 362 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 LDB2O43679 373 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 MGEA5O60502 916 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 TULP3O75386 442 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 PCNAP12004 261 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 CD6P30203 668 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 LCP2Q13094 533 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 DNASE1L3Q13609 305 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 IQSEC1Q6DN90 963 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 TAF2Q6P1X5 1199 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 STK32CQ86UX6 486 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 DPP10Q8N608 796 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 PIK3C3Q8NEB9 887 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 NDNFQ8TB73 568 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 FAR1Q8WVX9 515 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 PABPC5Q96DU9 382 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 MED16Q9Y2X0 877 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 DNAH12Q6ZR08 3092 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 SLC22A3O75751 556 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 RPS17P08708 135 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 RAP2AP10114 183 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 DARSP14868 501 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 EEF1DP29692 281 aaKnown RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 HPS1Q92902 700 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 NSMCE2Q96MF7 247 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 RDH12Q96NR8 316 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 SLC25A51Q9H1U9 297 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 BAG5Q9UL15 447 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 VPS4BO75351 444 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 SLC4A1P02730 911 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 GGT1P19440 569 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 FSHRP23945 695 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 MTHFRP42898 656 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 RPS6KA2Q15349 733 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 HID1Q8IV36 788 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 TRIB2Q92519 343 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 PPP1R2P1Q96PQ5 205 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 FAM49AQ9H0Q0 323 aaPredicted RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 ACTL8Q9H568 366 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 CSNK1G1Q9HCP0 422 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 PCDH12Q9NPG4 1184 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 SEMA4BQ9NPR2 832 aaPredicted RBP15.22■□□□□ 0.03
SDF4-207ENST00000494748 USE1Q9NZ43 259 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 KLQ9UEF7 1012 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 MAGEL2Q9UJ55 1249 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 TTC3P53804 2025 aa15.22■□□□□ 0.03
SDF4-207ENST00000494748 TYW5A2RUC4 315 aaKnown RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 SLC1A7O00341 560 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 GJA8P48165 433 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 PGFP49763 221 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 ACVR1Q04771 509 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 SULT1C3Q6IMI6 304 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 SLCO6A1Q86UG4 719 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 ZFAND4Q86XD8 727 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 RYBPQ8N488 228 aaPredicted RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 TADA1Q96BN2 335 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 ANKMY1Q9P2S6 941 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 GREB1Q4ZG55 1949 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 NOBOXO60393 691 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 DEAF1O75398 565 aaPredicted RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 PAGE1O75459 146 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 ATXN1LP0C7T5 689 aaKnown RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 AAK1Q2M2I8 961 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 PLA2G4EQ3MJ16 856 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 UGT3A1Q6NUS8 523 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 ENPP6Q6UWR7 440 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 PLEKHG7Q6ZR37 379 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 TMEM179BQ7Z7N9 219 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 SLC7A5P1Q8MH63 180 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 CLEC4FQ8N1N0 589 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 SCML4Q8N228 414 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 CASP10Q92851 521 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 SMOC2Q9H3U7 446 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 TFB2MQ9H5Q4 396 aaKnown RBP15.21■□□□□ 0.03
SDF4-207ENST00000494748 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 PCDHGB1Q9Y5G3 927 aa15.21■□□□□ 0.03
SDF4-207ENST00000494748 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 FAM234BA2RU67 622 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 TNPO2O14787 897 aaKnown RBP15.21■□□□□ 0.02
SDF4-207ENST00000494748 HOXD8P13378 290 aaPredicted RBP15.21■□□□□ 0.02
SDF4-207ENST00000494748 ADCYAP1R1P41586 468 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 MTPNP58546 118 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 KCNAB2Q13303 367 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 PTPRCAPQ14761 206 aa15.21■□□□□ 0.02
SDF4-207ENST00000494748 PGS1Q32NB8 556 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms