RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 OR2T11Q8NH01 316 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 EID2BQ96D98 161 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 SLC22A12Q96S37 553 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 LHX3Q9UBR4 397 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 CHD5Q8TDI0 1954 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 FAM149AA5PLN7 773 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 E2F3O00716 465 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 TFAP2AP05549 437 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 BMP1P13497 986 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 PSMC3P17980 439 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 CLCN4P51793 760 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 TGFBIQ15582 683 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 RABL3Q5HYI8 236 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 TBCELQ5QJ74 424 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 CWF19L1Q69YN2 538 aaKnown RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 FRA10AC1Q70Z53 315 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 DNAJB7Q7Z6W7 309 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 CAMK1DQ8IU85 385 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 DIS3LQ8TF46 1054 aaKnown RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 KCNJ9Q92806 393 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
CHMP3-209ENST00000494623 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 PLEKHG4BQ96PX9 1271 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 SLC52A3Q9NQ40 469 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 IL17CQ9P0M4 197 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 ZNF711Q9Y462 761 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 YIPF1Q9Y548 306 aa11.09□□□□□ -0.63
CHMP3-209ENST00000494623 A0A1W2PP18 115 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 A8MX80 341 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PRRG1O14668 218 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SYNCRIPO60506 623 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 KATNA1O75449 491 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SLC22A3O75751 556 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ESR1P03372 595 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 GKP32189 559 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CSKP41240 450 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CLCN7P51798 805 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ERVPABLB-1P60509 514 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ROR2Q01974 943 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PRKCQQ04759 706 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PAGE3Q5JUK9 113 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 FAM151BQ6UXP7 276 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 FNDC5Q8NAU1 212 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ZUFSPQ96AP4 578 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 NMD3Q96D46 503 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 RPL10LQ96L21 214 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 MYRFLQ96LU7 910 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF597Q96LX8 424 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 HBEGFQ99075 208 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 C1QTNF3Q9BXJ4 246 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 GRIP2Q9C0E4 1043 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PIF1Q9H611 641 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 AIG1Q9NVV5 245 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 HACD3Q9P035 362 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SLAMF8Q9P0V8 285 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 VPS51Q9UID3 782 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CCDC154A6NI56 674 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SAC3D1A6NKF1 404 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ABLIM3O94929 683 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PRR35P0CG20 571 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 UGT1A6P19224 532 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CA5AP35218 305 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CACNG1Q06432 222 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 VEPH1Q14D04 833 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PABPC1LQ4VXU2 614 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 INO80DQ53TQ3 878 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PTRHD1Q6GMV3 140 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 OGFOD2Q6N063 350 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 MFN1Q8IWA4 741 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ARL14EPQ8N8R7 260 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 METTL6Q8TCB7 284 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 WFDC5Q8TCV5 224 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CEP295NLQ96MC4 621 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 UHRF1Q96T88 793 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM79Q9BSE2 394 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 NUSAP1Q9BXS6 441 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 A0A1B0GTW7 788 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 DHRS12A0PJE2 317 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ASPDHA6ND91 283 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 H7C0S8 307 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PRMT5O14744 637 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SMAD6O43541 496 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 GUCA1CO95843 209 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 MTHFD1P11586 935 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 HSD17B1P14061 328 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 NCK1P16333 377 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms