RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TRIM54Q9BYV2 358 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 PTPRHQ9HD43 1115 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 FEM1BQ9UK73 627 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TBC1D24Q9ULP9 559 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 BTRCQ9Y297 605 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SLC12A8A0AV02 714 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CTDSP2O14595 271 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 C1RP00736 705 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TNNC2P02585 160 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 DBTP11182 482 aaKnown RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 GLULP15104 373 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CD36P16671 472 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 NAGAP17050 411 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 RRM2P31350 389 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 GRK5P34947 590 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 DDOSTP39656 456 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SLC1A2P43004 574 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 FCGRTP55899 365 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SLC35A2P78381 396 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 GBX1Q14549 363 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SYT16Q17RD7 645 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TBRG1Q3YBR2 411 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 EEF1DP3Q658K8 133 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 GET4Q7L5D6 327 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 NRARPQ7Z6K4 114 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 FAM109AQ8N4B1 249 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF555Q8NEP9 628 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 FBLIM1Q8WUP2 373 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 RASSF5Q8WWW0 418 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 NECTIN4Q96NY8 510 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 EML4Q9HC35 981 aaKnown RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ATP13A2Q9NQ11 1180 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 RPRD1BQ9NQG5 326 aaKnown RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SDR39U1Q9NRG7 319 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ACOXLQ9NUZ1 547 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 PCDHB14Q9Y5E9 798 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 AGRPO00253 132 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 EEF2KO00418 725 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 B4GALT5O43286 388 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PGLSO95336 258 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 HPRP00739 348 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 KRT6AP02538 564 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 KRT6BP04259 564 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 CYP2A7P20853 494 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 LIPAP38571 399 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SLAMF1Q13291 335 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 GPR50Q13585 617 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 FXNQ16595 210 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 UNC50Q53HI1 259 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 XKR3Q5GH77 459 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PXDC1Q5TGL8 231 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ARHGAP17Q68EM7 881 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TWF2Q6IBS0 349 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ESRP1Q6NXG1 681 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SPESP1Q6UW49 350 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 NDRG1Q92597 394 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 REXO5Q96IC2 774 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 MMP27Q9H306 513 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 DUSP21Q9H596 190 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SLA2Q9H6Q3 261 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ZFP14Q9HCL3 533 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 RANGRFQ9HD47 186 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 JPH1Q9HDC5 661 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ACOT13Q9NPJ3 140 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 NPAP1Q9NZP6 1156 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 UBA2Q9UBT2 640 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PCDHGB6Q9Y5F9 930 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 KRT87PA6NCN2 255 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 HS6ST1O60243 411 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PLA2G6O60733 806 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SUPT7LO94864 414 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 FTH1P02794 183 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 CCDC159P0C7I6 412 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 LINC00032P0C843 101 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PFKLP17858 780 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 NFKB1P19838 968 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 IL5RAQ01344 420 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SP2Q02086 613 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TOP3AQ13472 1001 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 LRRC26Q2I0M4 334 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 ZPBP2Q6X784 338 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 AFAP1L2Q8N4X5 818 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 GLB1L3Q8NCI6 653 aaPredicted RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 OR4M1Q8NGD0 313 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 NSMCE2Q96MF7 247 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 NSUN5Q96P11 429 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms