RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TRIM74Q86UV6 250 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 CEP97Q8IW35 865 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 C4orf33Q8N1A6 199 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 CLDN19Q8N6F1 224 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 NAT14Q8WUY8 206 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 KCNJ9Q92806 393 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 BIRC7Q96CA5 298 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 SMC6Q96SB8 1091 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 MYOCQ99972 504 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 TEX101Q9BY14 249 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
MCF2L-231ENST00000494043 PHPT1Q9NRX4 125 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-231ENST00000494043 PCMTD2Q9NV79 361 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 TAS2R13Q9NYV9 303 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 INVSQ9Y283 1065 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 MED16Q9Y2X0 877 aa11.27□□□□□ -0.61
MCF2L-231ENST00000494043 OAS3Q9Y6K5 1087 aaKnown RBP11.27□□□□□ -0.61
MCF2L-231ENST00000494043 GOLGA8RI6L899 631 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 FPGTO14772 594 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 SGTAO43765 313 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 NIPSNAP2O75323 286 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 VPS26AO75436 327 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 MPOP05164 745 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 SLC35E2BP0CK96 405 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 MYCLP1P12525 358 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 CREB1P16220 341 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 OAS2P29728 719 aaKnown RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PGGT1BP53609 377 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM115Q12893 351 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PDE1CQ14123 709 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF460Q14592 562 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 TAF1BQ53T94 588 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PPM1JQ5JR12 505 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 TSSK4Q6SA08 328 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 SLC36A4Q6YBV0 504 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 GCNT7Q6ZNI0 430 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 RAPH1Q70E73 1250 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 DET1Q7L5Y6 550 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 ADGRG6Q86SQ4 1221 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PIM3Q86V86 326 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 C1orf210Q8IVY1 113 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 FBXL6Q8N531 539 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 RASGEF1AQ8N9B8 481 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 DTWD2Q8NBA8 298 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM145Q8NBT3 493 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 CADM4Q8NFZ8 388 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 LKAAEAR1Q8TD35 194 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 FUBP1Q96AE4 644 aaKnown RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 ALKBH8Q96BT7 664 aaKnown RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 APOPT1Q96IL0 206 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 CABS1Q96KC9 395 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 FAM126AQ9BYI3 521 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 OR2AG1Q9H205 316 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 VPS11Q9H270 941 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 EBF2Q9HAK2 575 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 POPDC3Q9HBV1 291 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 TRIM39Q9HCM9 518 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 SSU72Q9NP77 194 aaKnown RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 MKS1Q9NXB0 559 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-231ENST00000494043 OR1A2Q9Y585 309 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 PLXND1Q9Y4D7 1925 aa11.26□□□□□ -0.61
MCF2L-231ENST00000494043 A0A087X1B8 175 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 A0A096LPK6 155 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 A0A1W2PPC4 97 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 POM121BA6NF01 834 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 IQCF5A8MTL0 148 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 E5RI56 91 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 F8W8V4 182 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 PRAMEF26H0Y7S4 382 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 QSOX1O00391 747 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 VEGFDO43915 354 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 WISP3O95389 354 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 C2P06681 752 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 HOXC4P09017 264 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 BRAFP15056 766 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CHRM3P20309 590 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 NR1D1P20393 614 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 BCKDHBP21953 392 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 HPDP32754 393 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 FNTBP49356 437 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 PRLHRP49683 370 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CLCN7P51798 805 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CTSCP53634 463 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CLDN2P57739 230 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 KIAA1024LP59773 190 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 RPL6Q02878 288 aaKnown RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CSTF1Q05048 431 aaKnown RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 GTF2H3Q13889 308 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 BCL7AQ4VC05 210 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 UGT3A1Q6NUS8 523 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 KYAT3Q6YP21 454 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms