RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF624Q9P2J8 865 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 IMPACTQ9P2X3 320 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 TRHDEQ9UKU6 1024 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 WDR37Q9Y2I8 494 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 BOD1L1Q8NFC6 3051 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 CCL22O00626 93 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 PRAMEF10O60809 474 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 CDK14O94921 469 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 F3P13726 295 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF7P17097 686 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-212ENST00000493940 WT1P19544 449 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-212ENST00000493940 SLC19A1P41440 591 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
HSPG2-212ENST00000493940 CXADRP78310 365 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 XIAPP98170 497 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 LRP8Q14114 963 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 ARHGAP40Q5TG30 622 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 FAM83HQ6ZRV2 1179 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-212ENST00000493940 PEX26Q7Z412 305 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 GLT6D1Q7Z4J2 308 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 PRUNE1Q86TP1 453 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 ZFAND4Q86XD8 727 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 KLHDC8BQ8IXV7 354 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 RASGEF1AQ8N9B8 481 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 VPS35Q96QK1 796 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 KCNK4Q9NYG8 393 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 AMFRQ9UKV5 643 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 DNAJC16Q9Y2G8 782 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 SLC30A1Q9Y6M5 507 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 CCDC88CQ9P219 2028 aa12.43□□□□□ -0.42
HSPG2-212ENST00000493940 SGTAO43765 313 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PRSS56P0CW18 603 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 RPL10P27635 214 aaKnown RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 CLCNKAP51800 687 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 MAPK10P53779 464 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 GEMP55040 296 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 HHEXQ03014 270 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PEX6Q13608 980 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 CLCA4Q14CN2 919 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 CCDC181Q5TID7 509 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 KCTD11Q693B1 232 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PDPK2PQ6A1A2 396 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 TAB3Q8N5C8 712 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 OR4K2Q8NGD2 314 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 OR13C4Q8NGS5 318 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 SLC35B2Q8TB61 432 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 ATG4AQ8WYN0 398 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 STRADBQ9C0K7 418 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 TRABDQ9H4I3 376 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 SARS2Q9NP81 518 aaKnown RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PDP2Q9P2J9 529 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 CPNE7Q9UBL6 633 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 FKBPLQ9UIM3 349 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 PCDHGA7Q9Y5G6 932 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
HSPG2-212ENST00000493940 C5orf60A6NFR6 353 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 OR52A4PA6NMU1 304 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 A8MU76 341 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 VEGFDO43915 354 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 TJP3O95049 919 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 THRAP10827 490 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 TPH1P17752 444 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 SPAM1P38567 509 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 CDKN1CP49918 316 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 KIF5AQ12840 1032 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 GPRC6AQ5T6X5 926 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 TMEM71Q6P5X7 295 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 PHYKPLQ8IUZ5 450 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 CDKL3Q8IVW4 592 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 LILRA3Q8N6C8 439 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 BEND7Q8N7W2 519 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 OR4D9Q8NGE8 314 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 RNF31Q96EP0 1072 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
HSPG2-212ENST00000493940 SPATA13Q96N96 652 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 SLC38A3Q99624 504 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 TMEM121Q9BTD3 319 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 DPH1Q9BZG8 443 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 OSGEPL1Q9H4B0 414 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 FAM96AQ9H5X1 160 aa12.41□□□□□ -0.42
HSPG2-212ENST00000493940 GLYATL1P3A0A0U1RQE8 302 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 TEX51A0A1B0GUA7 166 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 OR2AG2A6NM03 316 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 TMX2-CTNND1H3BSU7 103 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 KMOO15229 486 aa12.4□□□□□ -0.42
HSPG2-212ENST00000493940 NVLO15381 856 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms