RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 T-ENOLP0DO92 83 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 KITP10721 976 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 PKMP14618 531 aaKnown RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF7P17097 686 aaPredicted RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TFEBP19484 476 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ITGALP20701 1170 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 IMPDH1P20839 514 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 RPS3P23396 243 aaKnown RBP eCLIP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 RECQLP46063 649 aaPredicted RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 NAGLUP54802 743 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CYP4F8P98187 520 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CSHL1Q14406 222 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 E2F5Q15329 346 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ARL13AQ5H913 290 aaPredicted RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 USP45Q70EL2 814 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TTC30BQ8N4P2 665 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TEX9Q8N6V9 391 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 OR2AP1Q8NGE2 309 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 OR52K2Q8NGK3 314 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 SHKBP1Q8TBC3 707 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 SPPL3Q8TCT6 385 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 SH3RF2Q8TEC5 729 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 WFIKKN2Q8TEU8 576 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 FBLIM1Q8WUP2 373 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 LPGAT1Q92604 370 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 KCNJ9Q92806 393 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 L3HYPDHQ96EM0 354 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 LYSMD1Q96S90 227 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CCT7Q99832 543 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TBC1D10AQ9BXI6 508 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 SLC46A2Q9BY10 475 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TCF7L2Q9NQB0 619 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 BCAP29Q9UHQ4 241 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 TRMT6Q9UJA5 497 aaKnown RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CDYLQ9Y232 598 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF711Q9Y462 761 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ARL5AQ9Y689 179 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 KIAA1324LA8MWY0 1029 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 PRMT5O14744 637 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 ITM2AO43736 263 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SNAP91O60641 907 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 VPS4BO75351 444 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 WISP3O95389 354 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 PIGNO95427 931 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 TOP3BO95985 862 aaKnown RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SPATA31D3P0C874 917 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 THRAP10827 490 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF37AP17032 561 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SSTR4P31391 388 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 ABCG1P45844 678 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 GLRBP48167 497 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 NUMBP49757 651 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 RGS4P49798 205 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 COPAP53621 1224 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 IL2P60568 153 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 TRAF2Q12933 501 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 IHHQ14623 411 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 HERC3Q15034 1050 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 MAPRE2Q15555 327 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 FBXW10Q5XX13 1052 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 METTL2BQ6P1Q9 378 aaKnown RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 TTC23LQ6PF05 361 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 PAOXQ6QHF9 649 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SPATA31D4Q6ZUB0 917 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 UBE2Q1Q7Z7E8 422 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 BBS7Q8IWZ6 715 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 RAVER1Q8IY67 606 aaKnown RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 RBFAQ8N0V3 343 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 CCNYL1Q8N7R7 359 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 DTX3LQ8TDB6 740 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 HCAR2Q8TDS4 363 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 POF1BQ8WVV4 589 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 BADQ92934 168 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 KIAA1191Q96A73 305 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 ULK4Q96C45 1275 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 PDLIM5Q96HC4 596 aaKnown RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 LRIG1Q96JA1 1093 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 SLC22A12Q96S37 553 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 NMUR2Q9GZQ4 415 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 COG4Q9H9E3 785 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 ARL8BQ9NVJ2 186 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 IL17CQ9P0M4 197 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 MARCOQ9UEW3 520 aaPredicted RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 PPIL1Q9Y3C6 166 aa9.95□□□□□ -0.82
PRPF3-206ENST00000493553 OAS3Q9Y6K5 1087 aaKnown RBP9.95□□□□□ -0.82
PRPF3-206ENST00000493553 A0A0J9YYE9 177 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 UBA6A0AVT1 1052 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 RGSL1A5PLK6 1076 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CAPN8A6NHC0 703 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 B2RBV5 119 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 E5RI56 91 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 STX16-NPEPL1H3BU86 382 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 EIF3FO00303 357 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 STX16O14662 325 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms