RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 FASTKD3Q14CZ7 662 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CHRNA2Q15822 529 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GTDC1Q4AE62 458 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC58Q4VC31 144 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PHYHD1Q5SRE7 291 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 XP32Q5T750 250 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FAM171A1Q5VUB5 890 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC66Q68CR7 880 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SLC25A25Q6KCM7 469 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PRMT9Q6P2P2 845 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SHISA2Q6UWI4 295 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SYT13Q7L8C5 426 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TRMT11Q7Z4G4 463 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 HAUS6Q7Z4H7 955 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ADCK2Q7Z695 626 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RTN4RL2Q86UN3 420 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TAC4Q86UU9 113 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZSWIM9Q86XI8 627 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PLCZ1Q86YW0 608 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CNGA4Q8IV77 575 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CFAP206Q8IYR0 622 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FMR1NBQ8N0W7 255 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FAM86B1Q8N7N1 296 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TTC29Q8NA56 475 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MLKLQ8NB16 471 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TP53I13Q8NBR0 393 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OR5M1Q8NGP8 315 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 WDR48Q8TAF3 677 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GRAPLQ8TC17 118 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NRG4Q8WWG1 115 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 POMGNT1Q8WZA1 660 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RSC1A1Q92681 617 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TOP1MTQ969P6 601 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ELMO3Q96BJ8 720 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DAZAP1Q96EP5 407 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ANKRD36BP1Q96IX9 119 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PANX1Q96RD7 426 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TSC22D3Q99576 134 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 WDR83Q9BRX9 315 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MAGEB5Q9BZ81 275 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PKIBQ9C010 78 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SEMA4CQ9C0C4 833 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RGCCQ9H4X1 137 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MAN2C1Q9NTJ4 1040 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 HIF1ANQ9NWT6 349 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 BTG4Q9NY30 223 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GPRC5DQ9NZD1 345 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KCNN3Q9UGI6 736 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NARFQ9UHQ1 456 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 AJAP1Q9UKB5 411 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SARDHQ9UL12 918 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PPIEQ9UNP9 301 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NIP7Q9Y221 180 aaKnown RBP eCLIP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TSC22D4Q9Y3Q8 395 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHB1Q9Y5F3 818 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC187A0A096LP49 1063 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FAM181BA6NEQ2 426 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 C4orf47A7E2U8 309 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MIF4GDA9UHW6 222 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 KDM4EB2RXH2 506 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 H7C1D1 291 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RNF225M0QZC1 329 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 GPR25O00155 361 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 HAS3O00219 553 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PPM1DO15297 605 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 BCAT2O15382 392 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 DHX15O43143 795 aaKnown RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF862O60290 1169 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 JAK2O60674 1132 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PFKFB2O60825 505 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 NME6O75414 186 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 GMNNO75496 209 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RHOBTB1O94844 696 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FARP2O94887 1054 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 OXSR1O95747 527 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CALCAP01258 141 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 IL2RAP01589 272 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 GBAP04062 536 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 SERPING1P05155 500 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 FAM58BPP0C7Q3 252 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PLA2G4BP0C869 781 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 NME2P22392 152 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TACR3P29371 465 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 CDKN2CP42773 168 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 MAGEA11P43364 429 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 BCAP31P51572 246 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 STAT2P52630 851 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 HK3P52790 923 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 SLC5A3P53794 718 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 EPHB3P54753 998 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 ITGA1P56199 1179 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PRPS1P60891 318 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RAB4BP61018 213 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 PPP2R2BQ00005 443 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 RHAGQ02094 409 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TNK2Q07912 1038 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 C2orf54Q08AI8 447 aa4.18□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM115Q12893 351 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-220ENST00000492859 BAATQ14032 418 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms