RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	NOBOX	O60393	691 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	KCNJ13	O60928	360 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	MTX2	O75431	263 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	SLC2A4	P14672	509 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PNLIP	P16233	465 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	GLB1	P16278	677 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZNF7	P17097	686 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	MSH3	P20585	1137 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	AKT1	P31749	480 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	MC4R	P32245	332 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	VPS41	P49754	854 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	CLCNKA	P51800	687 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PPP1R7	Q15435	360 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	KHDC1	Q4VXA5	237 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCDC38	Q502W7	563 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PCID2	Q5JVF3	399 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	ARMC3	Q5W041	872 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	LRRC8B	Q6P9F7	803 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	C17orf82	Q86X59	251 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	TRAPPC5	Q8IUR0	188 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	CACTIN-AS1	Q8N1I8	211 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	NXPE1	Q8N323	547 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	MAPK15	Q8TD08	544 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	SLCO2A1	Q92959	643 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	DCUN1D1	Q96GG9	259 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	CDKN2AIPNL	Q96HQ2	116 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	IL22	Q9GZX6	179 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PCYOX1	Q9UHG3	505 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PLEKHM1	Q9Y4G2	1056 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	ST14	Q9Y5Y6	855 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	PTPRB	P23467	1997 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	KLHL33	A6NCF5	533 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	SRRM3	A6NNA2	597 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	CFAP99	D6REC4	459 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	GPR39	O43194	453 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	JUP	P14923	745 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	SESN2	P58004	480 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	INSM1	Q01101	510 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	CACNG1	Q06432	222 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	BIRC2	Q13490	618 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	KCNJ11	Q14654	390 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	INSC	Q1MX18	579 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZRANB3	Q5FWF4	1079 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	TSTD2	Q5T7W7	516 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	CRTC3	Q6UUV7	619 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	RASGEF1A	Q8N9B8	481 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	COPS8	Q99627	209 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	DDX47	Q9H0S4	455 aa	Known RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	KLC4	Q9NSK0	619 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	LRIT1	Q9P2V4	623 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	KCNK6	Q9Y257	313 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	TCAF1	Q9Y4C2	921 aa		13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-215	ENST00000492451	TRBV5-4	A0A0C4DH59	114 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	OR5K4	A6NMS3	321 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	RHPN2P1	A8MT19	583 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCL22	O00626	93 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	MLN	P12872	115 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	ACVR1	Q04771	509 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CAMK2B	Q13554	666 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	PERM1	Q5SV97	790 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	HES3	Q5TGS1	186 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	LYPLAL1	Q5VWZ2	237 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	TAS2R42	Q7RTR8	314 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	PCGF5	Q86SE9	256 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZNF547	Q8IVP9	402 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	NAGS	Q8N159	534 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	ARL14	Q8N4G2	192 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	AVL9	Q8NBF6	648 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	MCU	Q8NE86	351 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	MDM1	Q8TC05	714 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CPT1B	Q92523	772 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCDC74A	Q96AQ1	378 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	TTC1	Q99614	292 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCDC3	Q9BQI4	270 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	OSGEPL1	Q9H4B0	414 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	FAM96A	Q9H5X1	160 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	STN1	Q9H668	368 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	XAB2	Q9HCS7	855 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZDHHC3	Q9NYG2	299 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	TBC1D29	Q9UFV1	150 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	SLC23A2	Q9UGH3	650 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	CLCA2	Q9UQC9	943 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	PKD1L2	Q7Z442	2459 aa		13.61	□□□□□ -0.23
PTPN7-215	ENST00000492451	KIR2DS5	A0A0G2JLQ3	304 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451		A0A0G2JNG1	304 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCDC78	A2IDD5	438 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	TMEM8B	A6NDV4	472 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	KIR2DS3	K7RE56	304 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	FANCG	O15287	622 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	SNX2	O60749	519 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	TCEA3	O75764	348 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	POP7	O75817	140 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	MT-CO3	P00414	261 aa		13.6	□□□□□ -0.23
PTPN7-215	ENST00000492451	TUBB4A	P04350	444 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms