RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
HDAC3-212ENST00000492407 FBXO9Q9UK97 447 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-212ENST00000492407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC3-212ENST00000492407 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
HDAC3-212ENST00000492407 ANKRD36A6QL64 1941 aa9.01□□□□□ -0.97
HDAC3-212ENST00000492407 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 A0A0U1RQS6 177 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 LOC101059948A0A1B0GTJ6 334 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 A8MU76 341 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 AGRPO00253 132 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SLC25A14O95258 325 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 VIPP01282 170 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF7P17097 686 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF8P17098 575 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 VCLP18206 1134 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 GYS2P54840 703 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 TLE1Q04724 770 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 CDK18Q07002 472 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 CDC20Q12834 499 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SLC10A2Q12908 348 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 SEPT6Q14141 434 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SLC18A3Q16572 532 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 LARP7Q4G0J3 582 aaKnown RBP eCLIP9□□□□□ -0.97
HDAC3-212ENST00000492407 ATP13A4Q4VNC1 1196 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SLC9A4Q6AI14 798 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 CCDC70Q6NSX1 233 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 TIPARPQ7Z3E1 657 aaKnown RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 KDELC2Q7Z4H8 507 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 PRSS42Q7Z5A4 293 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 ADGRG6Q86SQ4 1221 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 NT5DC3Q86UY8 548 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 LRRTM4Q86VH4 590 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 CNTD1Q8N815 330 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 C9orf43Q8TAL5 461 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 KLHL6Q8WZ60 621 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SEC14L1Q92503 715 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 GLYATL1Q969I3 302 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 ZDHHC12Q96GR4 267 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SMIM14Q96QK8 99 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 TRIB3Q96RU7 358 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SPATA16Q9BXB7 569 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 TRABDQ9H4I3 376 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF768Q9H5H4 540 aaKnown RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 KLC4Q9NSK0 619 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 SEMA5BQ9P283 1151 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 KCND3Q9UK17 655 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 KCNK6Q9Y257 313 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 TTLL3Q9Y4R7 772 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 PCDHGA6Q9Y5G7 932 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 PCYT1BQ9Y5K3 369 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 DNMT3AQ9Y6K1 912 aaPredicted RBP9□□□□□ -0.97
HDAC3-212ENST00000492407 SPTA1P02549 2419 aa9□□□□□ -0.97
HDAC3-212ENST00000492407 MAST4O15021 2626 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SSU72P8A0A1W2PR75 194 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 NKX2-8O15522 239 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SNX2O60749 519 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 UBXN7O94888 489 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 EPOP01588 193 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 TMEM253P0C7T8 217 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 FGF5P12034 268 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 TCN2P20062 427 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 IDSP22304 550 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 HMGCLP35914 325 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SLC1A1P43005 524 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 NR2C2P49116 596 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 FOXK1P85037 733 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SNAP47Q5SQN1 464 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 KLHL35Q6PF15 583 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 C6orf15Q6UXA7 325 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-212ENST00000492407 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-212ENST00000492407 TRIM48Q8IWZ4 208 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 PLD5Q8N7P1 536 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 GPR26Q8NDV2 337 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 ZFPM2Q8WW38 1151 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 STARD8Q92502 1023 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 EID2BQ96D98 161 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 CTRCQ99895 268 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SPOCK3Q9BQ16 436 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 MAK16Q9BXY0 300 aaKnown RBP8.99□□□□□ -0.97
HDAC3-212ENST00000492407 OR2AG1Q9H205 316 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 CBX8Q9HC52 389 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 SLC40A1Q9NP59 571 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 PRDM8Q9NQV8 689 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 UTP6Q9NYH9 597 aaKnown RBP8.99□□□□□ -0.97
HDAC3-212ENST00000492407 PRKAB1Q9Y478 270 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 BSNQ9UPA5 3926 aa8.99□□□□□ -0.97
HDAC3-212ENST00000492407 ARHGEF17Q96PE2 2063 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CLEC18AA5D8T8 446 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 C3orf70A6NLC5 250 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-212ENST00000492407 C21orf140B9A014 251 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 GOLGA6L19H0YKK7 550 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 KCNK1O00180 336 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 APOL1O14791 398 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 MTSS1O43312 755 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 CDK14O94921 469 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 NDST3O95803 873 aa8.98□□□□□ -0.97
HDAC3-212ENST00000492407 NTRK1P04629 796 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms