RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 RAD9BQ6WBX8 426 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MARK2Q7KZI7 788 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 PLPPR4Q7Z2D5 763 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MCEMP1Q8IX19 187 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 SCYL3Q8IZE3 742 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 BBS5Q8N3I7 341 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MMGT1Q8N4V1 131 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 VGLL2Q8N8G2 317 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 POC5Q8NA72 575 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 NCOA7Q8NI08 942 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 ZCCHC10Q8TBK6 192 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 BCAS4Q8TDM0 211 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 OSCP1Q8WVF1 389 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 STAMQ92783 540 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 P3H4Q92791 437 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 NCLNQ969V3 563 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 ZBTB9Q96C00 473 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 GAL3ST4Q96RP7 486 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 ABHD1Q96SE0 405 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 PRRX2Q99811 253 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 DDX50Q9BQ39 737 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 CCDC77Q9BR77 488 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MLPHQ9BV36 600 aaPredicted RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 HEMGNQ9BXL5 484 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD2Q9GZV1 360 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 NSRP1Q9H0G5 558 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 VCX3BQ9H321 246 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 FAM83DQ9H4H8 585 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 STN1Q9H668 368 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 KAT14Q9H8E8 782 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 GLOD4Q9HC38 313 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.79□□□□□ -1.64
RTN4-215ENST00000491592 FAM114A2Q9NRY5 505 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 KLC4Q9NSK0 619 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MALT1Q9UDY8 824 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 MTRF1LQ9UGC7 380 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 PPIEQ9UNP9 301 aaKnown RBP4.79□□□□□ -1.64
RTN4-215ENST00000491592 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 DLGAP4Q9Y2H0 992 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 SNX9Q9Y5X1 595 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 SAR1BQ9Y6B6 198 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 LMO7Q8WWI1 1683 aa4.79□□□□□ -1.64
RTN4-215ENST00000491592 METP08581 1390 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 HEG1Q9ULI3 1381 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 NWD1Q149M9 1564 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 MROH7-TTC4A0A0A0MT08 1334 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 KLF18A0A0U1RQI7 1052 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 A0A1B0GUA9 196 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 URADA6NGE7 173 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 NCF1BA6NI72 391 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 SLC9B1P1A6NJY1 282 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 NCF1CA8MVU1 366 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 RASGRF2O14827 1237 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 SLC16A3O15427 465 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 KRT86O43790 486 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 NUDT21O43809 227 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 HSF2BPO75031 334 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 RECQL5O94762 991 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 NXPH3O95157 252 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 ABCB1P08183 1280 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 GCFC2P16383 781 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 CDH2P19022 906 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 GLRA2P23416 452 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 PCSK6P29122 969 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 MARCKSP29966 332 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 HOXC9P31274 260 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GGT5P36269 586 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GARSP41250 739 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 PITPNBP48739 271 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 DHPSP49366 369 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 ALDH18A1P54886 795 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 SLC8A3P57103 927 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 PSMC6P62333 389 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GNGT1P63211 74 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 PRAMEP78395 509 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 IRX1P78414 480 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 GOLGA8FQ08AF8 430 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GOLGA8DPQ0D2H9 430 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 BNIP1Q12981 228 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 KLF10Q13118 480 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GPM6BQ13491 265 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 GIT2Q14161 759 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 KCNAB1Q14722 419 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 NFIL3Q16649 462 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 PRICKLE4Q2TBC4 344 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD20A4Q4UJ75 823 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 PLEKHO1Q53GL0 409 aaPredicted RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 GLE1Q53GS7 698 aaKnown RBP4.78□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD20A8PQ5CZ79 823 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 COLEC12Q5KU26 742 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD20A2Q5SQ80 823 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 RIPPLY2Q5TAB7 128 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD20A1Q5TYW2 823 aa4.78□□□□□ -1.64
RTN4-215ENST00000491592 ANKRD20A3Q5VUR7 823 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms