RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 BTBD9Q96Q07 612 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 HTATIP2Q9BUP3 242 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 DNAJC11Q9NVH1 559 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 SPASTQ9UBP0 616 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 CORO2BQ9UQ03 480 aa7.28□□□□□ -1.24
NPHP3-208ENST00000490993 FAM32AQ9Y421 112 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 POLR2AP24928 1970 aaKnown RBP7.28□□□□□ -1.24
NPHP3-208ENST00000490993 GNG14A0A1W2PPG7 69 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 SGTAO43765 313 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TPST1O60507 370 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CLPTM1O96005 669 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GSRP00390 522 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 UMPSP11172 480 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GRIA3P42263 894 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ANXA11P50995 505 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RPL38P63173 70 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 FOXM1Q08050 763 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 LDLRAP1Q5SW96 308 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 NCEH1Q6PIU2 408 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TPRG1Q6ZUI0 275 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 LYSMD3Q7Z3D4 306 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 SYT12Q8IV01 421 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RAVER1Q8IY67 606 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TTC9BQ8N6N2 239 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CLP1Q92989 425 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ZNF641Q96N77 438 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TMEM79Q9BSE2 394 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 MEAF6Q9HAF1 191 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 KCNK13Q9HB14 408 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 NEMP2A6NFY4 417 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ENO2P09104 434 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ZCCHC18P0CG32 403 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CXCR2P25025 360 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GPR1P46091 355 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 PNLIPRP1P54315 467 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ERVK-8P63133 956 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 STARD3Q14849 445 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CYP2A13Q16696 494 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 MANEALQ5VSG8 457 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RTL10Q7L3V2 364 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 DET1Q7L5Y6 550 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RTN4RL1Q86UN2 441 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GLB1L3Q8NCI6 653 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 OR2T34Q8NGX1 318 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 OR2T3Q8NH03 318 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TSPEARQ8WU66 669 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 L3HYPDHQ96EM0 354 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ZNF778Q96MU6 729 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 OSBPL11Q9BXB4 747 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ACSS2Q9NR19 701 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 VPS51Q9UID3 782 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 EMCNQ9ULC0 261 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RAB26Q9ULW5 256 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 INVSQ9Y283 1065 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 DHRS12A0PJE2 317 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TBC1D3BA6NDS4 549 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 LEFTY2O00292 366 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RECQL5O94762 991 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 WDR47O94967 919 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 RPIAP49247 311 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 VEGFBP49765 207 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GDPD4Q6W3E5 623 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 SLC39A11Q8N1S5 342 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CPA6Q8N4T0 437 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ITCHQ96J02 903 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TRAPPC9Q96Q05 1148 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 KLF16Q9BXK1 252 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GRK3P35626 688 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 HNMTP50135 292 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 BNIPLQ7Z465 357 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ADCK2Q7Z695 626 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 PIM3Q86V86 326 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TREML1Q86YW5 311 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 TMEM126BQ8IUX1 230 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ANKLE1Q8NAG6 615 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 AUTS2Q8WXX7 1259 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 FIG4Q92562 907 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 QRFPRQ96P65 431 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CEP44Q9C0F1 390 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 CAAP1Q9H8G2 361 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 LRTM1Q9HBL6 345 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 IGSF5Q9NSI5 407 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 GIMAP4Q9NUV9 329 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 ATAD3AQ9NVI7 634 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 OSER1Q9NX31 292 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 DUS2Q9NX74 493 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 DEC1Q9P2X7 70 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 EIF2B4Q9UI10 523 aaKnown RBP7.27□□□□□ -1.25
NPHP3-208ENST00000490993 PARP14Q460N5 1801 aa7.27□□□□□ -1.25
NPHP3-208ENST00000490993 FAM234BA2RU67 622 aa7.26□□□□□ -1.25
NPHP3-208ENST00000490993 FFAR2O15552 330 aa7.26□□□□□ -1.25
NPHP3-208ENST00000490993 NIPSNAP2O75323 286 aa7.26□□□□□ -1.25
NPHP3-208ENST00000490993 SEC24DO94855 1032 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-208ENST00000490993 PCDH8O95206 1070 aa7.26□□□□□ -1.25
NPHP3-208ENST00000490993 F7P08709 466 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-208ENST00000490993 ACRP10323 421 aa7.26□□□□□ -1.25
NPHP3-208ENST00000490993 DGKGP49619 791 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms