RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TYRP1P17643 537 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 XRCC1P18887 633 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-216ENST00000490796 IDSP22304 550 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 CCR10P46092 362 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 UBE2IP63279 158 aaKnown RBP19.43■□□□□ 0.7
SREBF1-216ENST00000490796 FOXM1Q08050 763 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 KAZNQ674X7 775 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 TMEM26Q6ZUK4 368 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 TRAPPC5Q8IUR0 188 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 CNGA4Q8IV77 575 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 CXorf40BQ96DE9 158 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 TEKT5Q96M29 485 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 SLC25A18Q9H1K4 315 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 ADNPQ9H2P0 1102 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 UCK1Q9HA47 277 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 BPIFA1Q9NP55 256 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 KLHL8Q9P2G9 620 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-216ENST00000490796 FAM153AQ9UHL3 310 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 INTUQ9ULD6 942 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 ADGRG1Q9Y653 693 aa19.43■□□□□ 0.7
SREBF1-216ENST00000490796 CHUKO15111 745 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 MTSS1O43312 755 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 CST8O60676 142 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 RASSF9O75901 435 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 STK17BO94768 372 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 COMTP21964 271 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 PTPN3P26045 913 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 NFKB2Q00653 900 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 CLCA4Q14CN2 919 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 ZDHHC20Q5W0Z9 365 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 TADA1Q96BN2 335 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 SLC45A3Q96JT2 553 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 TGM7Q96PF1 710 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 TRIM4Q9C037 500 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 TRABDQ9H4I3 376 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 SLC23A2Q9UGH3 650 aa19.42■□□□□ 0.7
SREBF1-216ENST00000490796 ITGB6P18564 788 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 RPL10P27635 214 aaKnown RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 HALP42357 657 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 MC1RQ01726 317 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 ABHD18Q0P651 414 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 LLGL1Q15334 1064 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 RBM12BQ8IXT5 1001 aaKnown RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 BRSK1Q8TDC3 778 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 P3H4Q92791 437 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 C9orf72Q96LT7 481 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 VPS35Q96QK1 796 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 ZCCHC2Q9C0B9 1178 aaKnown RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 APMAPQ9HDC9 416 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 POT1Q9NUX5 634 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 SCHIP1Q9P0W5 487 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 SAE1Q9UBE0 346 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 TRIM10Q9UDY6 481 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 SPO11Q9Y5K1 396 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 BOD1L1Q8NFC6 3051 aa19.41■□□□□ 0.7
SREBF1-216ENST00000490796 MN1Q10571 1320 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-216ENST00000490796 AKR1B15C9JRZ8 316 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-216ENST00000490796 PSTPIP1O43586 416 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 ANKRD34CP0C6C1 535 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 PRKAR1AP10644 381 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 NFKB1P19838 968 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 SLC19A1P41440 591 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 CDKN2BP42772 138 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 SEPHS1P49903 392 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 CSRP3P50461 194 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 GFERP55789 205 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 POLE2P56282 527 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 WNT3AP56704 352 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 TMEM115Q12893 351 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-216ENST00000490796 KCNAB2Q13303 367 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 PRKD1Q15139 912 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-216ENST00000490796 PPP2R5EQ16537 467 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 ATP13A5Q4VNC0 1218 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 SPOCD1Q6ZMY3 1216 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 PID1Q7Z2X4 250 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 CCDC50Q8IVM0 306 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 UNC5BQ8IZJ1 945 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 SLC25A41Q8N5S1 370 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 ESX1Q8N693 406 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.4■□□□□ 0.7
SREBF1-216ENST00000490796 HACD3Q9P035 362 aa19.4■□□□□ 0.7
SREBF1-216ENST00000490796 ZNF624Q9P2J8 865 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-216ENST00000490796 LOC101059948A0A1B0GTJ6 334 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 AURKAO14965 403 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 TOX3O15405 576 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-216ENST00000490796 NKX2-8O15522 239 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 HMGCLP35914 325 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 SPAM1P38567 509 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 DRG2P55039 364 aaKnown RBP19.39■□□□□ 0.69
SREBF1-216ENST00000490796 ABRAXAS1Q6UWZ7 409 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 ZC3H18Q86VM9 953 aaKnown RBP19.39■□□□□ 0.69
SREBF1-216ENST00000490796 RNF214Q8ND24 703 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 BLOC1S5Q8TDH9 187 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 ZDHHC12Q96GR4 267 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 VAT1Q99536 393 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 ULBP3Q9BZM4 244 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 IL17BQ9UHF5 180 aa19.39■□□□□ 0.69
SREBF1-216ENST00000490796 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms