RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 BUD23O43709 281 aaKnown RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 CRTAMO95727 393 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 EML2O95834 649 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 LPOP22079 712 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 SLC5A2P31639 672 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEC13-218ENST00000490283 LIMK2P53671 638 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 MAPK10P53779 464 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 TMEM115Q12893 351 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 SQSTM1Q13501 440 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 TAF1AQ15573 450 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 NKAIN2Q5VXU1 208 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 GPR155Q7Z3F1 870 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 TMPRSS9Q7Z410 1059 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 CCDC74BQ96LY2 380 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 EPB41L1Q9H4G0 881 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 PRORYQ9H606 182 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 PRDM8Q9NQV8 689 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 FEZ2Q9UHY8 353 aaPredicted RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 GUCA1BQ9UMX6 200 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 DNAJC16Q9Y2G8 782 aa17.21■□□□□ 0.35
SEC13-218ENST00000490283 DSPP15924 2871 aaKnown RBP17.21■□□□□ 0.35
SEC13-218ENST00000490283 ARHGEF17Q96PE2 2063 aaPredicted RBP17.2■□□□□ 0.34
SEC13-218ENST00000490283 IGHV5-10-1A0A0J9YXX1 117 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
SEC13-218ENST00000490283 DDX3YO15523 660 aaKnown RBP17.2■□□□□ 0.34
SEC13-218ENST00000490283 NRDCO43847 1150 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 ITIH1P19827 911 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 IDSP22304 550 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 AKT1P31749 480 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 MAPK9P45984 424 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 EPHA4P54764 986 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 CHRNA6Q15825 494 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 TMEM71Q6P5X7 295 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 AGBL5Q8NDL9 886 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 HES6Q96HZ4 224 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 UBL7Q96S82 380 aaPredicted RBP17.2■□□□□ 0.34
SEC13-218ENST00000490283 TBL1YQ9BQ87 522 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 APOL2Q9BQE5 337 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 CPNE7Q9UBL6 633 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 CAPN6Q9Y6Q1 641 aa17.2■□□□□ 0.34
SEC13-218ENST00000490283 ZFYVE26Q68DK2 2539 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 TEX51A0A1B0GUA7 166 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 A6NCN8 305 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 ARHGAP6O43182 974 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 KCNJ13O60928 360 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 PRAMEF1O95521 474 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 VIPP01282 170 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 ADRA1AP35348 466 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 HALP42357 657 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 C16orf72Q14CZ0 275 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 SEPT7Q16181 437 aaKnown RBP17.19■□□□□ 0.34
SEC13-218ENST00000490283 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 P3H1Q32P28 736 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 RANBP10Q6VN20 620 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 FAM71DQ8N9W8 422 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 RCBTB1Q8NDN9 531 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 DDHD1Q8NEL9 900 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 OR4K2Q8NGD2 314 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 NCSTNQ92542 709 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 GORASP1Q9BQQ3 440 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 PCDHB11Q9Y5F2 797 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
SEC13-218ENST00000490283 A0A0U1RQJ8 604 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 LILRA5A6NI73 299 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 PSMD3O43242 534 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A9O60656 530 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 THRAP10827 490 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 HOXB3P14651 431 aaPredicted RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A6P19224 532 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 MSH3P20585 1137 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A1P22309 533 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A4P22310 534 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 CD82P27701 267 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 CSF2RBP32927 897 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A3P35503 534 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 HADHAP40939 763 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 LONRF2Q1L5Z9 754 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 KHDC1Q4VXA5 237 aaKnown RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 GPRC6AQ5T6X5 926 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 WDR74Q6RFH5 385 aaPredicted RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 ZNF574Q6ZN55 896 aaPredicted RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 AMZ2Q86W34 360 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 ZNF398Q8TD17 642 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 USP7Q93009 1102 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 CXorf40BQ96DE9 158 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 ZNF514Q96K75 400 aaPredicted RBP17.18■□□□□ 0.34
SEC13-218ENST00000490283 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 B3GNT4Q9C0J1 378 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 LRRC40Q9H9A6 602 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A7Q9HAW7 530 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A10Q9HAW8 530 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 UGT1A8Q9HAW9 530 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 SMOXQ9NWM0 555 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 SLC23A2Q9UGH3 650 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
SEC13-218ENST00000490283 TMPRSS11EQ9UL52 423 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms