RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PSD3Q9NYI0 1048 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 DNAJB4Q9UDY4 337 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 PLAGL1Q9UM63 463 aa3.84□□□□□ -1.79
CD46-216ENST00000490278 SAA2-SAA4A0A096LPE2 208 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 LNP1A1A4G5 178 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 GLOD5A6NK44 160 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 ACOT8O14734 319 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 CLGNO14967 610 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 ZNF217O75362 1048 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 AVILO75366 819 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 CAMTA2O94983 1202 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 HSP90AA1P07900 732 aaKnown RBP3.83□□□□□ -1.8
CD46-216ENST00000490278 TRIM21P19474 475 aaKnown RBP3.83□□□□□ -1.8
CD46-216ENST00000490278 KCNA5P22460 613 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 HRH2P25021 359 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 HSD17B4P51659 736 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 STAT2P52630 851 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 CTSCP53634 463 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 TMF1P82094 1093 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 COG7P83436 770 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 PPP2R2BQ00005 443 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 NUCB1Q02818 461 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 RELQ04864 619 aaPredicted RBP3.83□□□□□ -1.8
CD46-216ENST00000490278 CXCL9Q07325 125 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 BECN1Q14457 450 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 MEP1AQ16819 746 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 IZUMO4Q1ZYL8 232 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 TMEM35AQ53FP2 167 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 MFSD4BQ5TF39 518 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 C9orf57Q5W0N0 161 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 ZDHHC20Q5W0Z9 365 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 GALNT5Q7Z7M9 940 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 ADGRA1Q86SQ6 560 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 TMEM219Q86XT9 240 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 CEP97Q8IW35 865 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 SLC5A8Q8N695 610 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 ZNF441Q8N8Z8 693 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 SLC38A5Q8WUX1 472 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 IGSF21Q96ID5 467 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 DDOQ99489 341 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 GFI1Q99684 422 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 RTN4RQ9BZR6 473 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 DDX31Q9H8H2 851 aaKnown RBP3.83□□□□□ -1.8
CD46-216ENST00000490278 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.83□□□□□ -1.83e-7■■■■■ 37
CD46-216ENST00000490278 CLIC5Q9NZA1 410 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 TSPYL4Q9UJ04 414 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 B3GALT5Q9Y2C3 310 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 PCDHGB1Q9Y5G3 927 aa3.83□□□□□ -1.8
CD46-216ENST00000490278 PRAG1Q86YV5 1406 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 CGNL1Q0VF96 1302 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 A0A1W2PP11 408 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PLSCR5A0PG75 271 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 J3QR06 171 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 SH2B2O14492 632 aaPredicted RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 ADAMDEC1O15204 470 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 ZBTB43O43298 467 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 FGF3P11487 239 aaPredicted RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PRLRP16471 622 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 LMAN1P49257 510 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 ISL1P61371 349 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 EEF1A1P68104 462 aaKnown RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 KRT33BQ14525 404 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 ZNF234Q14588 700 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 ASIC2Q16515 512 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 CCDC96Q2M329 555 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 IGSF11Q5DX21 431 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 EEF1A1P5Q5VTE0 462 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 GPR139Q6DWJ6 353 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PRSS57Q6UWY2 283 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 UNQ6126/PRO20091Q6UXV3 157 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD46-216ENST00000490278 ZNF704Q6ZNC4 412 aaPredicted RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 ZNF534Q76KX8 674 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 PRPF39Q86UA1 669 aaKnown RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 TMPRSS12Q86WS5 348 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 DNAAF5Q86Y56 855 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 KMT5CQ86Y97 462 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD46-216ENST00000490278 MCUQ8NE86 351 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 APPL2Q8NEU8 664 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PPP4R1Q8TF05 950 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 SLF1Q9BQI6 1058 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 SYT17Q9BSW7 474 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 HGH1Q9BTY7 390 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 CENPOQ9BU64 300 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 MRPL1Q9BYD6 325 aaKnown RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 EBF2Q9HAK2 575 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 NKIRAS2Q9NYR9 191 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 MORF4L1Q9UBU8 362 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 AMACRQ9UHK6 382 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 ZNF148Q9UQR1 794 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms