RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 BPIFA1Q9NP55 256 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 EFR3BQ9Y2G0 817 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 R3HDM2Q9Y2K5 976 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 B3GALT1Q9Y5Z6 326 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 EPN1Q9Y6I3 576 aaPredicted RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 CCDC88CQ9P219 2028 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TRBV23OR9-2A0A075B6M9 112 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 TCRBV7S2A1N4TA0A589 114 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 RHPN2P1A8MT19 583 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 HACD1B0YJ81 288 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 GPR89AB7ZAQ6 455 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 BUD23O43709 281 aaKnown RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 TPM1P09493 284 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 GPR89BP0CG08 455 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 PYGMP11217 842 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 PSMB4P28070 264 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 VAV2P52735 878 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 ZNF140P52738 457 aaPredicted RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 EPHA4P54764 986 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 GPLD1P80108 840 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 DMPKQ09013 629 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 XRCC4Q13426 336 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 ZFYVE27Q5T4F4 411 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 PHF19Q5T6S3 580 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 TMEM71Q6P5X7 295 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 WDR74Q6RFH5 385 aaPredicted RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 TIPARPQ7Z3E1 657 aaKnown RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 PIM3Q86V86 326 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 NDUFAF2Q8N183 169 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 RASGEF1AQ8N9B8 481 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 RSC1A1Q92681 617 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 RBM41Q96IZ5 413 aaKnown RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 SPATA16Q9BXB7 569 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 UCK1Q9HA47 277 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 CPNE7Q9UBL6 633 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 PACSIN2Q9UNF0 486 aaPredicted RBP11.64□□□□□ -0.55
SRSF4-204ENST00000489898 KCTD3Q9Y597 815 aa11.64□□□□□ -0.55
SRSF4-204ENST00000489898 MED13Q9UHV7 2174 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 OR52A4PA6NMU1 304 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 B4E171 279 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 TMX2-CTNND1H3BSU7 103 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ZRANB2O95218 330 aaKnown RBP eCLIP11.63□□□□□ -0.552e-8■□□□□ 11.3
SRSF4-204ENST00000489898 ASMTLO95671 621 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 DLGAP3O95886 979 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 AGTP01019 485 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 JMJD7P0C870 316 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ZNF7P17097 686 aaPredicted RBP11.63□□□□□ -0.55
SRSF4-204ENST00000489898 HLA-DPA1P20036 260 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 TSPAN7P41732 249 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 GDF10P55107 478 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 RHDQ02161 417 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 MPP3Q13368 585 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 PEX6Q13608 980 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 LY6DQ14210 128 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 CLCA4Q14CN2 919 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 CHRNA6Q15825 494 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 AGAP9Q5VTM2 703 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ABRAXAS1Q6UWZ7 409 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 WASH2PQ6VEQ5 465 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 RCOR2Q8IZ40 523 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 CCHCR1Q8TD31 782 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 P3H4Q92791 437 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 NKD1Q969G9 470 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 WBP1Q96G27 269 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 CCNL2Q96S94 520 aaPredicted RBP11.63□□□□□ -0.55
SRSF4-204ENST00000489898 VAT1Q99536 393 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 CMKLR1Q99788 373 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 DESI2Q9BSY9 194 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 DDA1Q9BW61 102 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 OSBPL8Q9BZF1 889 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 WASH6PQ9NQA3 447 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KLC4Q9NSK0 619 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 KLHL8Q9P2G9 620 aaPredicted RBP11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ZNHIT2Q9UHR6 403 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
SRSF4-204ENST00000489898 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
SRSF4-204ENST00000489898 MTSS1O43312 755 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 UGT1A9O60656 530 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 SLC25A14O95258 325 aaPredicted RBP11.62□□□□□ -0.55
SRSF4-204ENST00000489898 PLA2G2AP14555 144 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 ITGB6P18564 788 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 XRCC1P18887 633 aaPredicted RBP11.62□□□□□ -0.55
SRSF4-204ENST00000489898 UGT1A6P19224 532 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 UGT1A1P22309 533 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 UGT1A4P22310 534 aa11.62□□□□□ -0.55
SRSF4-204ENST00000489898 PSMA3P25788 255 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms