RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ARMC12Q5T9G4 340 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 AFTPHQ6ULP2 937 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 MBOAT1Q6ZNC8 495 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 FRA10AC1Q70Z53 315 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CLHC1Q8NHS4 586 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CD200R1Q8TD46 325 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 FBXL20Q96IG2 436 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 SDR39U1Q9NRG7 319 aaPredicted RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 ZNHIT2Q9UHR6 403 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 GPR45Q9Y5Y3 372 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TMEM189-UBE2V1I3L0A0 370 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TSPAN12O95859 305 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 FGF4P08620 206 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 HSPA7P48741 367 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 ALDH7A1P49419 539 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 RHOAP61586 193 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 LIPEQ05469 1076 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 RBBP5Q15291 538 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 TAF1AQ15573 450 aaPredicted RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 TGFBIQ15582 683 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TYSND1Q2T9J0 566 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TPGS1Q6ZTW0 290 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 KIAA2013Q8IYS2 634 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 DGCR14Q96DF8 476 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 CIPCQ9C0C6 399 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 DERL2Q9GZP9 239 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TNKS2Q9H2K2 1166 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 ZFP14Q9HCL3 533 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 FNIP2Q9P278 1114 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 PCTPQ9UKL6 214 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 TBC1D30Q9Y2I9 924 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CHD7Q9P2D1 2997 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 DNAH14Q0VDD8 3507 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CCDC154A6NI56 674 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CD160O95971 181 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 OGNP20774 298 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 ACADVLP49748 655 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 CDH4P55283 916 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 SMAD3P84022 425 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 RING1Q06587 406 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 BLOC1S3Q6QNY0 202 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 GPR150Q8NGU9 434 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 MAGEE2Q8TD90 523 aaPredicted RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 ALG2Q9H553 416 aa15.55■□□□□ 0.08
BRD9-208ENST00000489816 FARSBQ9NSD9 589 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 DUS2Q9NX74 493 aaKnown RBP15.55■□□□□ 0.08
BRD9-208ENST00000489816 USP34Q70CQ2 3546 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 DOCK6Q96HP0 2047 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 KDELR3O43731 214 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 FOXD2O60548 495 aaPredicted RBP15.54■□□□□ 0.08
BRD9-208ENST00000489816 PYGLP06737 847 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 GJA1P17302 382 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 NFKB2Q00653 900 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 NR6A1Q15406 480 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 EPHX4Q8IUS5 362 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 CHERPQ8IWX8 916 aaKnown RBP15.54■□□□□ 0.08
BRD9-208ENST00000489816 OR10Q1Q8NGQ4 319 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 RHEBL1Q8TAI7 183 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 VPS50Q96JG6 964 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 EGFL8Q99944 293 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 KCTD14Q9BQ13 255 aaPredicted RBP15.54■□□□□ 0.08
BRD9-208ENST00000489816 SMOXQ9NWM0 555 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 SARDHQ9UL12 918 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 SLC22A3O75751 556 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 MBL2P11226 248 aaPredicted RBP15.54■□□□□ 0.08
BRD9-208ENST00000489816 G6PDP11413 515 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 SLC26A3P40879 764 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 ZXDBP98169 803 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 HMGCS1Q01581 520 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 SELPLGQ14242 412 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 PYCR3Q53H96 274 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 C6orf136Q5SQH8 315 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 TXNDC8Q6A555 127 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 PTRHD1Q6GMV3 140 aaKnown RBP15.54■□□□□ 0.08
BRD9-208ENST00000489816 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.083e-6■□□□□ 11.1
BRD9-208ENST00000489816 Q6ZSR9 355 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 GPRIN3Q6ZVF9 776 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 MILR1Q7Z6M3 343 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 LKAAEAR1Q8TD35 194 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 RNF145Q96MT1 663 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 C17orf80Q9BSJ5 609 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.54■□□□□ 0.08
BRD9-208ENST00000489816 SLC30A1Q9Y6M5 507 aa15.54■□□□□ 0.08
BRD9-208ENST00000489816 EI24O14681 340 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 CR2P20023 1033 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 PTGR1Q14914 329 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 CXorf57Q6NSI4 855 aaKnown RBP15.53■□□□□ 0.08
BRD9-208ENST00000489816 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
BRD9-208ENST00000489816 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 ZNF597Q96LX8 424 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 ZNF599Q96NL3 588 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 GPATCH1Q9BRR8 931 aaKnown RBP15.53■□□□□ 0.08
BRD9-208ENST00000489816 OLAHQ9NV23 265 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 THEGQ9P2T0 379 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 ANKRD36A6QL64 1941 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 RSL1D1O76021 490 aaKnown RBP15.53■□□□□ 0.08
BRD9-208ENST00000489816 ESRRBO95718 433 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 CHEK2O96017 543 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 IDO1P14902 403 aa15.53■□□□□ 0.08
BRD9-208ENST00000489816 SELPP16109 830 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms