RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TRAPPC5Q8IUR0 188 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 SLITRK4Q8IW52 837 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 TBL1YQ9BQ87 522 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 GORASP1Q9BQQ3 440 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 NUDT22Q9BRQ3 303 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 ZCCHC2Q9C0B9 1178 aaKnown RBP17.59■□□□□ 0.41
ABCF3-217ENST00000489719 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.59■□□□□ 0.41
ABCF3-217ENST00000489719 CPNE7Q9UBL6 633 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 SLC23A2Q9UGH3 650 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 FEZ2Q9UHY8 353 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-217ENST00000489719 TMPRSS11EQ9UL52 423 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 DNAJC16Q9Y2G8 782 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 ARL5AQ9Y689 179 aa17.59■□□□□ 0.41
ABCF3-217ENST00000489719 PSMD3O43242 534 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 NRDCO43847 1150 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 KCNJ13O60928 360 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 HOXB3P14651 431 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 IDSP22304 550 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 SLC5A2P31639 672 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 LIMK2P53671 638 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 TLE3Q04726 772 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 KLF1Q13351 362 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 TRA2AQ13595 282 aaKnown RBP eCLIP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 SPARCL1Q14515 664 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 PTPRCAPQ14761 206 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 PLA2G4EQ3MJ16 856 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 TMEM71Q6P5X7 295 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 ZNF574Q6ZN55 896 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 CLEC14AQ86T13 490 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 ZNF761Q86XN6 746 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 OR4K2Q8NGD2 314 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 OR4D9Q8NGE8 314 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 WDR70Q9NW82 654 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.4
ABCF3-217ENST00000489719 PCDHGA7Q9Y5G6 932 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 LRP4O75096 1905 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 CFAP47Q6ZTR5 3102 aa17.58■□□□□ 0.4
ABCF3-217ENST00000489719 IGHV5-10-1A0A0J9YXX1 117 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 PDZK1P1A8MUH7 402 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 DUX1O43812 170 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 STIP1P31948 543 aaKnown RBP17.57■□□□□ 0.4
ABCF3-217ENST00000489719 MAPK10P53779 464 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 UCNP55089 124 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 OLIG2Q13516 323 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 RPS6KA1Q15418 735 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 KHDC1Q4VXA5 237 aaKnown RBP17.57■□□□□ 0.4
ABCF3-217ENST00000489719 TMEM164Q5U3C3 297 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 TRIM48Q8IWZ4 208 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 SLC35B2Q8TB61 432 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 NCSTNQ92542 709 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 CRELD1Q96HD1 420 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 TMEM121Q9BTD3 319 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 FRMD8P1Q9BZ68 369 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-217ENST00000489719 ARNT2Q9HBZ2 717 aa17.57■□□□□ 0.4
ABCF3-217ENST00000489719 CHD6Q8TD26 2715 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 TCRBV7S2A1N4TA0A589 114 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 A6NCN8 305 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 HGSO14964 777 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 NVLO15381 856 aaKnown RBP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 POP7O75817 140 aaKnown RBP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 VIPP01282 170 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 CCDC175P0C221 793 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 XRCC1P18887 633 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 ITIH1P19827 911 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 MSH3P20585 1137 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 MPSTP25325 297 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 AKT1P31749 480 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 CSTF2P33240 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 MAPK9P45984 424 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 C16orf72Q14CZ0 275 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 P3H1Q32P28 736 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 GPRC6AQ5T6X5 926 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 TMEM220Q6QAJ8 160 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 AMZ2Q86W34 360 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 ZNF547Q8IVP9 402 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 LRRC8AQ8IWT6 810 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 RCBTB1Q8NDN9 531 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 DDHD1Q8NEL9 900 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 USP7Q93009 1102 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 CCDC74BQ96LY2 380 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 ALS2CR12Q96Q35 445 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 PRORYQ9H606 182 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 ASB8Q9H765 288 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 KCTD3Q9Y597 815 aa17.56■□□□□ 0.4
ABCF3-217ENST00000489719 DNMT3AQ9Y6K1 912 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-217ENST00000489719 SRP72O76094 671 aaKnown RBP17.55■□□□□ 0.4
ABCF3-217ENST00000489719 PRAMEF1O95521 474 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 METTL18O95568 372 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 RPL10P27635 214 aaKnown RBP17.55■□□□□ 0.4
ABCF3-217ENST00000489719 HADHAP40939 763 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 EPHA4P54764 986 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 CXADRP78310 365 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 CFHR1Q03591 330 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 SEPT7Q16181 437 aaKnown RBP17.55■□□□□ 0.4
ABCF3-217ENST00000489719 LONRF2Q1L5Z9 754 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 DENND5AQ6IQ26 1287 aa17.55■□□□□ 0.4
ABCF3-217ENST00000489719 WDR74Q6RFH5 385 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-217ENST00000489719 ABRAXAS1Q6UWZ7 409 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms