RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 XPR1Q9UBH6 696 aa9.91□□□□□ -0.82
USP11-211ENST00000489111 KANSL1LA0AUZ9 987 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 IQCF5A8MTL0 148 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TK2O00142 265 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 INPP4BO15327 924 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 H2AFYO75367 372 aaKnown RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 MTX2O75431 263 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 SLC25A14O95258 325 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 WISP3O95389 354 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 FTH1P02794 183 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 PCCBP05166 539 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 BPGMP07738 259 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 CHRNB1P11230 501 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ATP1B2P14415 290 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 GABRG2P18507 467 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TAC1P20366 129 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 BGNP21810 368 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 CA5AP35218 305 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 RGS4P49798 205 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 SEC24CP53992 1094 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ATP6V0D1P61421 351 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TIAL1Q01085 375 aaKnown RBP eCLIP9.9□□□□□ -0.82
USP11-211ENST00000489111 CREB5Q02930 508 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 DPTQ07507 201 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ASPHQ12797 758 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 DLG1Q12959 904 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 GTF2H3Q13889 308 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ACAP2Q15057 778 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 CHI3L2Q15782 390 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 SEL1L3Q68CR1 1132 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 PAQR3Q6TCH7 311 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ZYG11AQ6WRX3 759 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 RGS9BPQ6ZS82 235 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 OTOAQ7RTW8 1153 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 CPLX4Q7Z7G2 160 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 FAM124AQ86V42 546 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 FSTL5Q8N475 847 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 ZBTB2Q8N680 514 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TSTD1Q8NFU3 115 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 RAB3IL1Q8TBN0 382 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ANKRD49Q8WVL7 239 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 ZNF75CPQ92670 426 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 INPP5DQ92835 1189 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 CCDC97Q96F63 343 aaPredicted RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 UBXN10Q96LJ8 280 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 NELL2Q99435 816 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 MECRQ9BV79 373 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 DERL2Q9GZP9 239 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 RABEP2Q9H5N1 569 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 MANSC1Q9H8J5 431 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 LMAN1LQ9HAT1 526 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 SPATS2LQ9NUQ6 558 aaKnown RBP9.9□□□□□ -0.82
USP11-211ENST00000489111 SIRPGQ9P1W8 387 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 COPG2Q9UBF2 871 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 TMPRSS11EQ9UL52 423 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 MED16Q9Y2X0 877 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 DHRS7Q9Y394 339 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 PRSS21Q9Y6M0 314 aa9.9□□□□□ -0.82
USP11-211ENST00000489111 XIRP2A4UGR9 3374 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3DA0A087WVF3 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3IA0A087WXS9 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3EA0A087X179 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3KA0A087X1G2 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 A0A1W2PQU0 124 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 KRBA1A5PL33 1030 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3FA6NER0 549 aaPredicted RBP9.89□□□□□ -0.83
USP11-211ENST00000489111 LRRC72A6NJI9 287 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 FAM170BA6NMN3 283 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 CHURC1-FNTBB4DL54 471 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3LB9A6J9 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 K7ESM1 405 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 BTN3A1O00481 513 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 STK25O00506 426 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 NDUFAB1O14561 156 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 KPNA5O15131 536 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 SMIM24O75264 130 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3HP0C7X1 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 KCNA4P22459 653 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 DGKAP23743 735 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 CLCN7P51798 805 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 STARD6P59095 220 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 B4GALNT1Q00973 533 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 PCLAFQ15004 111 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 SYTL3Q4VX76 610 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TECRLQ5HYJ1 363 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3GQ6DHY5 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3CQ6IPX1 549 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 NEK5Q6P3R8 708 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TMEM207Q6UWW9 146 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 ADAMTSL4Q6UY14 1074 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 FAM47EQ6ZV65 393 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 SYT13Q7L8C5 426 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 NLRP8Q86W28 1048 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms