RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 C1QL1O75973 258 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 CDK14O94921 469 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 CTNNA2P26232 953 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 CSTF2P33240 577 aaKnown RBP eCLIP22.68■■□□□ 1.22
COL9A3-213ENST00000489045 SPAM1P38567 509 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 SRSF6Q13247 344 aaKnown RBP22.68■■□□□ 1.22
COL9A3-213ENST00000489045 KIAA1614Q5VZ46 1190 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 ZNF547Q8IVP9 402 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 GDAP1Q8TB36 358 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 PMEPA1Q969W9 287 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 TAAR9Q96RI9 348 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 GORASP1Q9BQQ3 440 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 TIMM29Q9BSF4 260 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 FSD1LQ9BXM9 530 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 OSBPL8Q9BZF1 889 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 IL26Q9NPH9 171 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 IL17CQ9P0M4 197 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 SCHIP1Q9P0W5 487 aaPredicted RBP22.68■■□□□ 1.22
COL9A3-213ENST00000489045 EFR3BQ9Y2G0 817 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 DNAJC16Q9Y2G8 782 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 BUD23O43709 281 aaKnown RBP22.67■■□□□ 1.22
COL9A3-213ENST00000489045 CD82P27701 267 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 PTPN7P35236 360 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 MAPK9P45984 424 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 VAV2P52735 878 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 EPHA4P54764 986 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 RWDD2BP57060 319 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 UBE2IP63279 158 aaKnown RBP22.67■■□□□ 1.22
COL9A3-213ENST00000489045 SNAP47Q5SQN1 464 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 WDR74Q6RFH5 385 aaPredicted RBP22.67■■□□□ 1.22
COL9A3-213ENST00000489045 GAS2L3Q86XJ1 694 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 AVL9Q8NBF6 648 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 NCSTNQ92542 709 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 TTC9Q92623 222 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 ART4Q93070 314 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 FAM118BQ9BPY3 351 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 FICDQ9BVA6 458 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 TBC1D10AQ9BXI6 508 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.67■■□□□ 1.22
COL9A3-213ENST00000489045 PDP2Q9P2J9 529 aa22.67■■□□□ 1.22
COL9A3-213ENST00000489045 GRID2IPA4D2P6 1211 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 AGTP01019 485 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 GEMP55040 296 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 EIF3EP60228 445 aaKnown RBP22.66■■□□□ 1.22
COL9A3-213ENST00000489045 TMEM115Q12893 351 aaPredicted RBP22.66■■□□□ 1.22
COL9A3-213ENST00000489045 CHRNA6Q15825 494 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 SEPT7Q16181 437 aaKnown RBP22.66■■□□□ 1.22
COL9A3-213ENST00000489045 ZDHHC20Q5W0Z9 365 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 ITPRIPL1Q6GPH6 555 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 AADACL2Q6P093 401 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 FAM151BQ6UXP7 276 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 VASH2Q86V25 355 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 FAM129CQ86XR2 697 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 DTX1Q86Y01 620 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 CDKL3Q8IVW4 592 aaPredicted RBP22.66■■□□□ 1.22
COL9A3-213ENST00000489045 LRRC57Q8N9N7 239 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 CCDC112Q8NEF3 446 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 ALG3Q92685 438 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 FERMT1Q9BQL6 677 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 OCIAD1Q9NX40 245 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 PCDHB11Q9Y5F2 797 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 PCDHGA3Q9Y5H0 932 aa22.66■■□□□ 1.22
COL9A3-213ENST00000489045 LILRA5A6NI73 299 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 PRR19A6NJB7 356 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 EFCAB7A8K855 629 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 A8MU76 341 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 PDZK1P1A8MUH7 402 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.65■■□□□ 1.22
COL9A3-213ENST00000489045 GPR39O43194 453 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 ANXA9O76027 345 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 RBP3P10745 1247 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 ARSDP51689 593 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 C19orf57Q0VDD7 668 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 GTF2H3Q13889 308 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 MANEAQ5SRI9 462 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 C11orf96Q7Z7L8 435 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 KIAA1328Q86T90 577 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 TRAPPC5Q8IUR0 188 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 DTX3LQ8TDB6 740 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 WBP1Q96G27 269 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 BAG1Q99933 345 aaPredicted RBP22.65■■□□□ 1.22
COL9A3-213ENST00000489045 SLC39A1Q9NY26 324 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.65■■□□□ 1.22
COL9A3-213ENST00000489045 PKP3Q9Y446 797 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 PIEZO2Q9H5I5 2752 aa22.65■■□□□ 1.22
COL9A3-213ENST00000489045 GLYATL1P3A0A0U1RQE8 302 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 STMND1H3BQB6 276 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 GAPDHSO14556 408 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-213ENST00000489045 KCNN4O15554 427 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A9O60656 530 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 PYGMP11217 842 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 XRCC1P18887 633 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A6P19224 532 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A1P22309 533 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A4P22310 534 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 PSMB4P28070 264 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A3P35503 534 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 CETN2P41208 172 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 ANKRD20A2Q5SQ80 823 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 ANKRD20A1Q5TYW2 823 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms